RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 NDUFB8O95169 186 aa10.72□□□□□ -0.69
VHL-201ENST00000256474 OR4C5Q8NGB2 326 aa10.72□□□□□ -0.69
VHL-201ENST00000256474 LINC00574Q9H8X3 128 aa10.72□□□□□ -0.69
VHL-201ENST00000256474 TMEM213A2RRL7 107 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 TOMM40O96008 361 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 TMEM30BQ3MIR4 351 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 FAM231DQ6ZW35 169 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 MRPL27Q9P0M9 148 aaKnown RBP10.71□□□□□ -0.69
VHL-201ENST00000256474 HRNRQ86YZ3 2850 aaPredicted RBP10.71□□□□□ -0.69
VHL-201ENST00000256474 K7EQM0 130 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 CCL21O00585 134 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 ZNF207O43670 478 aaKnown RBP10.71□□□□□ -0.69
VHL-201ENST00000256474 NCR2O95944 276 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 HLA-DRB1P01911 266 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 OR5AL1P0C617 328 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 HLA-DMBP28068 263 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 URB1-AS1Q96HZ7 61 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 SCNM1Q9BWG6 230 aa10.71□□□□□ -0.69
VHL-201ENST00000256474 C2orf70A6NJV1 201 aa10.71□□□□□ -0.7
VHL-201ENST00000256474 SYS1-DBNDD2H3BUS1 97 aa10.71□□□□□ -0.7
VHL-201ENST00000256474 Q8NA96 180 aa10.71□□□□□ -0.7
VHL-201ENST00000256474 C18orf15Q96N68 181 aa10.71□□□□□ -0.7
VHL-201ENST00000256474 PSG8Q9UQ74 426 aa10.71□□□□□ -0.7
VHL-201ENST00000256474 A0A1B0GUT8 65 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 IGKV1-17P01599 117 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 FAM106CPP0CH98 169 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 ZNF672Q499Z4 452 aaPredicted RBP10.7□□□□□ -0.7
VHL-201ENST00000256474 FAM106AQ4KMX7 169 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 TMEM75Q8N9X5 138 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 RNF125Q96EQ8 232 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 FSTL3O95633 263 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 NHLH1Q02575 133 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 LDLRAD2Q5SZI1 272 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 TEX22C9J3V5 150 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 ECSCRQ19T08 205 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 AAMDCQ9H7C9 122 aa10.7□□□□□ -0.7
VHL-201ENST00000256474 NPIPB5A8MRT5 1133 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 CCL25O15444 150 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 RBPJQ06330 500 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 MRGPRG-AS1Q2M3A8 158 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 ZNF738Q8NE65 137 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 AP5S1Q9NUS5 200 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 LTAP01374 205 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 ORM1P02763 201 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 TM4SF20Q53R12 229 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 AMN1Q8IY45 258 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 OTORQ9NRC9 128 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 DLX6P56179 175 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 FBLN7Q53RD9 439 aa10.69□□□□□ -0.7
VHL-201ENST00000256474 IFI27P40305 119 aaPredicted RBP10.68□□□□□ -0.7
VHL-201ENST00000256474 CSN1S1P47710 185 aa10.68□□□□□ -0.7
VHL-201ENST00000256474 IGHV3OR16-10A0A075B7F0 116 aa10.68□□□□□ -0.7
VHL-201ENST00000256474 SLC25A34Q6PIV7 304 aa10.68□□□□□ -0.7
VHL-201ENST00000256474 RIGQ13278 110 aa10.68□□□□□ -0.7
VHL-201ENST00000256474 TWIST1Q15672 202 aa10.68□□□□□ -0.7
VHL-201ENST00000256474 MLST8Q9BVC4 326 aa10.68□□□□□ -0.7
VHL-201ENST00000256474 C7orf69Q9H7B7 122 aa10.68□□□□□ -0.7
VHL-201ENST00000256474 IGKV3-7A0A075B6H7 116 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 B9A039 149 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 D6R8Y8 96 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 NDUFS7O75251 213 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 MYCNOSP40205 109 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 LOXL1Q08397 574 aaPredicted RBP10.67□□□□□ -0.7
VHL-201ENST00000256474 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 CELSR2Q9HCU4 2923 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 FBLL1A6NHQ2 334 aaKnown RBP10.67□□□□□ -0.7
VHL-201ENST00000256474 IGLV1-47P01700 117 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 RELQ04864 619 aaPredicted RBP10.67□□□□□ -0.7
VHL-201ENST00000256474 LINC00311Q8N616 119 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 LINC00527Q9UJ94 153 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 A0A1B0GXF2 115 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 TMEM189A5PLL7 270 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 FAM120AOSQ5T036 256 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 ATP5L2Q7Z4Y8 100 aa10.67□□□□□ -0.7
VHL-201ENST00000256474 WIPF2Q8TF74 440 aaPredicted RBP10.67□□□□□ -0.7
VHL-201ENST00000256474 NBR2O15453 112 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 LIPFP07098 398 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 DPM3Q9P2X0 92 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 CSPG4Q6UVK1 2322 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 TRBV19A0A075B6N1 114 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 ZNF785A8K8V0 405 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 I3L2K1 104 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 K7EIM0 57 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 C3orf36Q3SXR2 165 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 RAB37Q96AX2 223 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 FAM208BQ5VWN6 2430 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 CRYGCP07315 174 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 NMUP48645 174 aa10.66□□□□□ -0.7
VHL-201ENST00000256474 RASL11AQ6T310 242 aa10.65□□□□□ -0.7
VHL-201ENST00000256474 ZNF491Q8N8L2 437 aa10.65□□□□□ -0.7
VHL-201ENST00000256474 SETD2Q9BYW2 2564 aaPredicted RBP10.65□□□□□ -0.7
VHL-201ENST00000256474 C19orf71A6NCJ1 209 aa10.65□□□□□ -0.7
VHL-201ENST00000256474 EVI2AP22794 236 aa10.65□□□□□ -0.7
VHL-201ENST00000256474 RNASE8Q8TDE3 154 aaKnown RBP10.65□□□□□ -0.7
VHL-201ENST00000256474 TIMD4Q96H15 378 aa10.65□□□□□ -0.7
VHL-201ENST00000256474 KLF12Q9Y4X4 402 aa10.65□□□□□ -0.7
VHL-201ENST00000256474 GPR183P32249 361 aa10.65□□□□□ -0.71
VHL-201ENST00000256474 KLF5Q13887 457 aaPredicted RBP10.65□□□□□ -0.71
VHL-201ENST00000256474 CDSNQ15517 529 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms