RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ASPHD1Q5U4P2 390 aa15.13■□□□□ 0.01
SMARCC1-201ENST00000254480 JPT2Q9H910 190 aa15.13■□□□□ 0.01
SMARCC1-201ENST00000254480 CACNA1HO95180 2353 aa15.13■□□□□ 0.01
SMARCC1-201ENST00000254480 HIST3H2BBQ8N257 126 aa15.12■□□□□ 0.01
SMARCC1-201ENST00000254480 M0R2P5 195 aa15.12■□□□□ 0.01
SMARCC1-201ENST00000254480 IGKV1-6A0A0C4DH72 117 aa15.12■□□□□ 0.01
SMARCC1-201ENST00000254480 COLCA2A8K830 154 aa15.12■□□□□ 0.01
SMARCC1-201ENST00000254480 TMEM86BQ8N661 226 aa15.12■□□□□ 0.01
SMARCC1-201ENST00000254480 KLK9Q9UKQ9 250 aa15.12■□□□□ 0.01
SMARCC1-201ENST00000254480 ZNF503-AS2A6NEH8 195 aa15.12■□□□□ 0.01
SMARCC1-201ENST00000254480 C9orf139Q6ZV77 190 aa15.12■□□□□ 0.01
SMARCC1-201ENST00000254480 TMEM158Q8WZ71 300 aa15.12■□□□□ 0.01
SMARCC1-201ENST00000254480 FHL1Q13642 323 aa15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 ZNF524Q96C55 264 aa15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 K7ENP7 123 aa15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 SSC4DQ8WTU2 575 aa15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 ZNF625Q96I27 306 aaPredicted RBP15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 C8orf49Q96NF6 230 aa15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 A0A087X0K7 114 aa15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 TOMM40O96008 361 aa15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 GUSBP1Q15486 140 aa15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 ZNF479Q96JC4 524 aa15.11■□□□□ 0.01
SMARCC1-201ENST00000254480 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.1■□□□□ 0.015e-8■■■■■ 34.8
SMARCC1-201ENST00000254480 MSMBP08118 114 aa15.1■□□□□ 0.01
SMARCC1-201ENST00000254480 SPINK13Q1W4C9 94 aa15.1■□□□□ 0.01
SMARCC1-201ENST00000254480 TEX43Q6ZNM6 134 aa15.1■□□□□ 0.01
SMARCC1-201ENST00000254480 IGFBPL1Q8WX77 278 aa15.1■□□□□ 0.01
SMARCC1-201ENST00000254480 SPAG8Q99932 426 aaPredicted RBP15.1■□□□□ 0.01
SMARCC1-201ENST00000254480 SPXQ9BT56 116 aa15.1■□□□□ 0.01
SMARCC1-201ENST00000254480 NDUFAF3Q9BU61 184 aa15.1■□□□□ 0.01
SMARCC1-201ENST00000254480 ZSWIM8A7E2V4 1837 aa15.1■□□□□ 0.01
SMARCC1-201ENST00000254480 OOSP1A8MZH6 123 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 GGTLC3B5MD39 225 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 C1orf122Q6ZSJ8 110 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 FNDC1Q4ZHG4 1894 aaPredicted RBP15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 TICRRQ7Z2Z1 1910 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 NDUFB8O95169 186 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 Q6ZR03 302 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 INSP01308 110 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 OR2K2Q8NGT1 345 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 PRTN3P24158 256 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 ERG28Q9UKR5 140 aa15.09■□□□□ 0.01
SMARCC1-201ENST00000254480 LY6G6EA0A0G2JKS1 128 aa15.08■□□□□ 0.01
SMARCC1-201ENST00000254480 SSBP2P81877 361 aaPredicted RBP15.08■□□□□ 0.01
SMARCC1-201ENST00000254480 RNF5Q99942 180 aa15.08■□□□□ 0.01
SMARCC1-201ENST00000254480 U3KQA8 63 aa15.08■□□□□ 0.01
SMARCC1-201ENST00000254480 UBE2CO00762 179 aa15.08■□□□□ 0
SMARCC1-201ENST00000254480 SAMD5Q5TGI4 173 aa15.08■□□□□ 0
SMARCC1-201ENST00000254480 USMG5Q96IX5 58 aa15.08■□□□□ 0
SMARCC1-201ENST00000254480 THSD7BQ9C0I4 1608 aa15.08■□□□□ 0
SMARCC1-201ENST00000254480 DAZ1Q9NQZ3 744 aaKnown RBP15.08■□□□□ 0
SMARCC1-201ENST00000254480 C6orf226Q5I0X4 101 aa15.08■□□□□ 0
SMARCC1-201ENST00000254480 SLC25A2Q9BXI2 301 aa15.08■□□□□ 0
SMARCC1-201ENST00000254480 BCL6BQ8N143 479 aaPredicted RBP15.07■□□□□ 0
SMARCC1-201ENST00000254480 TMEM213A2RRL7 107 aa15.07■□□□□ 0
SMARCC1-201ENST00000254480 FAM223BA6NKX1 122 aa15.07■□□□□ 0
SMARCC1-201ENST00000254480 ARMS2P0C7Q2 107 aa15.07■□□□□ 0
SMARCC1-201ENST00000254480 FAM223AQ8IWN6 122 aa15.07■□□□□ 0
SMARCC1-201ENST00000254480 TRAV12-2A0A075B6T6 113 aa15.07■□□□□ 0
SMARCC1-201ENST00000254480 MORN3Q6PF18 240 aaPredicted RBP15.07■□□□□ 0
SMARCC1-201ENST00000254480 PROK2Q9HC23 129 aa15.07■□□□□ 0
SMARCC1-201ENST00000254480 TRBV24-1A0A075B6N3 115 aa15.07■□□□□ 0
SMARCC1-201ENST00000254480 TPSG1Q9NRR2 321 aa15.07■□□□□ 0
SMARCC1-201ENST00000254480 A0A1B0GUS0 222 aa15.06■□□□□ 0
SMARCC1-201ENST00000254480 SLC25A16P16260 332 aa15.06■□□□□ 0
SMARCC1-201ENST00000254480 GATA4P43694 442 aa15.06■□□□□ 0
SMARCC1-201ENST00000254480 DIAPH2-AS1Q14236 149 aa15.06■□□□□ 0
SMARCC1-201ENST00000254480 TMEM155Q4W5P6 130 aa15.06■□□□□ 0
SMARCC1-201ENST00000254480 FAM110DQ8TAY7 271 aaPredicted RBP15.06■□□□□ 0
SMARCC1-201ENST00000254480 TRBV6-6A0A0A6YYG2 114 aa15.06■□□□□ 0
SMARCC1-201ENST00000254480 WDR86Q86TI4 376 aa15.06■□□□□ 0
SMARCC1-201ENST00000254480 TRAV8-4A0A0B4J246 113 aa15.06■□□□□ 0
SMARCC1-201ENST00000254480 INS-IGF2F8WCM5 200 aa15.06■□□□□ 0
SMARCC1-201ENST00000254480 VCYO14598 125 aa15.05■□□□□ -0
SMARCC1-201ENST00000254480 Q86TA4 180 aa15.05■□□□□ -0
SMARCC1-201ENST00000254480 GAGE12JA6NER3 117 aa15.05■□□□□ -0
SMARCC1-201ENST00000254480 GAGE1Q13065 139 aa15.05■□□□□ -0
SMARCC1-201ENST00000254480 GAGE4Q13068 117 aa15.05■□□□□ -0
SMARCC1-201ENST00000254480 GAGE5Q13069 117 aa15.05■□□□□ -0
SMARCC1-201ENST00000254480 GAGE13Q4V321 117 aa15.05■□□□□ -0
SMARCC1-201ENST00000254480 TRAV1-1A0A0B4J248 108 aa15.04■□□□□ -0
SMARCC1-201ENST00000254480 C3orf79P0CE67 100 aa15.04■□□□□ -0
SMARCC1-201ENST00000254480 HELZP42694 1942 aaKnown RBP15.04■□□□□ -0
SMARCC1-201ENST00000254480 LAMTOR3Q9UHA4 124 aa15.04■□□□□ -0
SMARCC1-201ENST00000254480 FOXL2NBQ6ZUU3 175 aa15.04■□□□□ -0
SMARCC1-201ENST00000254480 REG4Q9BYZ8 158 aa15.04■□□□□ -0
SMARCC1-201ENST00000254480 TNFSF13O75888 250 aa15.04■□□□□ -0
SMARCC1-201ENST00000254480 MED13LQ71F56 2210 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 MS4A6AQ9H2W1 248 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 IGHV3-38A0A0C4DH36 116 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 CFHR2P36980 270 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 CYYR1Q96J86 154 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 SHANK2-AS3Q9BTD1 123 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 TMEM242Q9NWH2 141 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 MMP23AO75900 390 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 HSD52Q0P140 79 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 A0A096LPF7 62 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 A8MWV9 139 aa15.03■□□□□ -0
SMARCC1-201ENST00000254480 F5H768 121 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms