RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 LAGE3Q14657 143 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 LINC00158P58513 81 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 CSTL1Q9H114 145 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 SIP14410 1827 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 SNRPD3P62318 126 aaKnown RBP6.14□□□□□ -1.43
RIF1-201ENST00000243326 IGKV1-16P04430 117 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 FAM90A1Q86YD7 464 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 TRAV12-1A0A0B4J245 112 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 CRYGSP22914 178 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 STAG3L3P0CL85 134 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 ATP5J2P56134 94 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 TRBV24-1A0A075B6N3 115 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 C5orf67F2Z3F1 127 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 CHCHD1Q96BP2 118 aaKnown RBP6.14□□□□□ -1.43
RIF1-201ENST00000243326 CCL19Q99731 98 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 GFRA3O60609 400 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 IGLL1P15814 213 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 IGHV3-38A0A0C4DH36 116 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 SP7Q8TDD2 431 aaPredicted RBP6.14□□□□□ -1.43
RIF1-201ENST00000243326 COLQQ9Y215 455 aaPredicted RBP6.14□□□□□ -1.43
RIF1-201ENST00000243326 WDR90Q96KV7 1748 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 TRAV9-1A0A075B6T8 112 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 A0A1B0GW15 77 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 PLA2G2EQ9NZK7 142 aa6.14□□□□□ -1.43
RIF1-201ENST00000243326 TMEM8BA6NDV4 472 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 NMSQ5H8A3 153 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 TMEM75Q8N9X5 138 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 SPXQ9BT56 116 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 TRAV30A0A087WSZ9 112 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 PRCDQ00LT1 54 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 MRAPQ8TCY5 172 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 TRAV13-1A0A0B4J241 112 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 FRMD6-AS1P0C7T7 363 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 MORN5Q5VZ52 161 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 TMEM42Q69YG0 159 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 FAM168AQ92567 244 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 IGHV1-46P01743 117 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 RPL35AP18077 110 aaKnown RBP6.13□□□□□ -1.43
RIF1-201ENST00000243326 NEU4Q8WWR8 484 aaPredicted RBP6.13□□□□□ -1.43
RIF1-201ENST00000243326 TMEM200BQ69YZ2 307 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 UBE2E2Q96LR5 201 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 ZNF562Q6V9R5 426 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 PAX9P55771 341 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 BRD3OSQ6XYD6 125 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 SSC4DQ8WTU2 575 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 PRR19A6NJB7 356 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 ZSWIM8A7E2V4 1837 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 FABP5P3A8MUU1 101 aa6.13□□□□□ -1.43
RIF1-201ENST00000243326 M0R2P5 195 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 LTBRP36941 435 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 SEC11AP67812 179 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 NBR2O15453 112 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 SH2D6Q7Z4S9 175 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 Q0VFX4 171 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 ZC2HC1BQ5TFG8 222 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 TRGV2A0A075B6R0 118 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 DKK1O94907 266 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 NSUN5P1Q3KNT7 163 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 PIMREGQ9BSJ6 248 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 IQCF6A8MYZ5 107 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 H3BMG7 143 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 PFN1P07737 140 aaKnown RBP6.12□□□□□ -1.43
RIF1-201ENST00000243326 IGLC2P0DOY2 106 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 IGLC3P0DOY3 106 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 SLC25A16P16260 332 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 IL17RELQ6ZVW7 336 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 OSR1Q8TAX0 266 aaPredicted RBP6.12□□□□□ -1.43
RIF1-201ENST00000243326 RNASE8Q8TDE3 154 aaKnown RBP6.12□□□□□ -1.43
RIF1-201ENST00000243326 KLK9Q9UKQ9 250 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 FCN3O75636 299 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 SLC25A15Q9Y619 301 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 Q6P435 159 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 HLA-DMBP28068 263 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 DKK2Q9UBU2 259 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 K7EN84 100 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 ZNF876PQ49A33 203 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 FGF11Q92914 225 aa6.12□□□□□ -1.43
RIF1-201ENST00000243326 C18orf32Q8TCD1 76 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 TRBV20-1A0A075B6N2 111 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 C9orf153Q5TBE3 101 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 CSRP2Q16527 193 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 HLA-DRB4P13762 266 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 DNM1P46Q6ZS02 220 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 HLA-DRB4X5D2U9 266 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 DIAPH2-AS1Q14236 149 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 MRPL51Q4U2R6 128 aaKnown RBP6.11□□□□□ -1.43
RIF1-201ENST00000243326 SLC25A2Q9BXI2 301 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 IGKV1-39P01597 117 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 IGKV1D-39P04432 117 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 C17orf77Q96MU5 243 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 GATA1P15976 413 aaPredicted RBP6.11□□□□□ -1.43
RIF1-201ENST00000243326 DPM3Q9P2X0 92 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 LINC01549A6NIU2 74 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 MAPK1IP1LQ8NDC0 245 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 H3BRM9 83 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 IGHV1-24A0A0C4DH33 117 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 CFAP161Q6P656 301 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 TPSG1Q9NRR2 321 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 TMEM14EPQ6UXP3 125 aa6.11□□□□□ -1.43
RIF1-201ENST00000243326 IGHV2-5P01817 119 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms