RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SYNJ2BPP57105 145 aa9.37□□□□□ -0.91
LAMA4-201ENST00000230538 SSBP2P81877 361 aaPredicted RBP9.37□□□□□ -0.91
LAMA4-201ENST00000230538 MLANAQ16655 118 aa9.37□□□□□ -0.91
LAMA4-201ENST00000230538 ARHGEF17Q96PE2 2063 aaPredicted RBP9.37□□□□□ -0.91
LAMA4-201ENST00000230538 PLXNA3P51805 1871 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 FNDC10F2Z333 226 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 MCRIP2Q9BUT9 160 aaKnown RBP9.36□□□□□ -0.91
LAMA4-201ENST00000230538 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 DEFB130BP0DP73 79 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 DEFB130AP0DP74 79 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 ESDP10768 282 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 LYL1P12980 280 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 ZNF124Q15973 351 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 UNQ6494/PRO21346Q6UXR6 183 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 Q6ZS49 121 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 PRIMA1Q86XR5 153 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 RNF114Q9Y508 228 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 OVOL3O00110 214 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 IGKV1-16P04430 117 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 IL17RELQ6ZVW7 336 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 LIME1Q9H400 295 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 KIF26BQ2KJY2 2108 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 LY6G5BQ8NDX9 201 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
LAMA4-201ENST00000230538 GFRA4Q9GZZ7 299 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 MSRB2Q9Y3D2 182 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 SBF1O95248 1867 aa9.36□□□□□ -0.91
LAMA4-201ENST00000230538 ADCYAP1P18509 176 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 RUSC1-AS1Q66K80 236 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 TRPT1Q86TN4 253 aaKnown RBP9.35□□□□□ -0.91
LAMA4-201ENST00000230538 IGHG3P01860 377 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 KIR3DS1Q14943 382 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 E7EQL1 145 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 DEFB131AP59861 70 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 ZC2HC1BQ5TFG8 222 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 C1orf122Q6ZSJ8 110 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 KLF12Q9Y4X4 402 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 MPV17L2Q567V2 206 aa9.35□□□□□ -0.91
LAMA4-201ENST00000230538 MAJINQ3KP22 176 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 ZNRD1Q9P1U0 126 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 DKK1O94907 266 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 ARMS2P0C7Q2 107 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 TMEM75Q8N9X5 138 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 CHAC1Q9BUX1 264 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 APC2O95996 2303 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 DOCK6Q96HP0 2047 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 PDE6HQ13956 83 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 Q6ZS92 163 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 FOXL2NBQ6ZUU3 175 aa9.34□□□□□ -0.91
LAMA4-201ENST00000230538 CITED2Q99967 270 aaPredicted RBP9.34□□□□□ -0.91
LAMA4-201ENST00000230538 A0A1W2PPI3 338 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 LINC00479Q96M42 142 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 GAGE2AQ6NT46 116 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 C8orf49Q96NF6 230 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 HS3ST6Q96QI5 342 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 Q6ZRM9 215 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 ANAPC10Q9UM13 185 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 ATP6V0E1O15342 81 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 FREM3P0C091 2139 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
LAMA4-201ENST00000230538 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 FHL1Q13642 323 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 FAM110DQ8TAY7 271 aaPredicted RBP9.32□□□□□ -0.92
LAMA4-201ENST00000230538 MYLKQ15746 1914 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 DLEU1O43261 78 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 PYY3Q5JQD4 70 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 C3orf56Q8N813 242 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 ZNF318Q5VUA4 2279 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 MSMBP08118 114 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 CFHR3Q02985 330 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 LURAP1LQ8IV03 231 aa9.32□□□□□ -0.92
LAMA4-201ENST00000230538 LINC01619G3V211 115 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 TP53BP1Q12888 1972 aaPredicted RBP9.31□□□□□ -0.92
LAMA4-201ENST00000230538 UBE2E1P51965 193 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 TMEM213A2RRL7 107 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 KNCNA6PVL3 124 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 XCL2Q9UBD3 114 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 C9JAW5 83 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 GAGE1Q13065 139 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 GAGE4Q13068 117 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 GAGE5Q13069 117 aa9.31□□□□□ -0.92
LAMA4-201ENST00000230538 RPL32P62910 135 aaKnown RBP9.3□□□□□ -0.92
LAMA4-201ENST00000230538 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 ZNF664Q8N3J9 261 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 NDUFB8O95169 186 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 GATA3P23771 443 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 STPG4Q8N801 248 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 ZNF492Q9P255 531 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 KLK9Q9UKQ9 250 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 IGHV3-16A0A0C4DH30 117 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 SP5Q6BEB4 398 aaPredicted RBP9.3□□□□□ -0.92
LAMA4-201ENST00000230538 PFN1P07737 140 aaKnown RBP9.3□□□□□ -0.92
LAMA4-201ENST00000230538 CFHR2P36980 270 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 MST1LQ2TV78 715 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 TMEM14BQ9NUH8 114 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 PRSS46E5RG02 174 aa9.3□□□□□ -0.92
LAMA4-201ENST00000230538 ZNF561-AS1K7EIQ3 104 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms