RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CD28P10747 220 aa11.21□□□□□ -0.62
HCFC2-201ENST00000229330 Q8TAT8 98 aa11.21□□□□□ -0.62
HCFC2-201ENST00000229330 VGLL1Q99990 258 aa11.21□□□□□ -0.62
HCFC2-201ENST00000229330 H3BMG7 143 aa11.21□□□□□ -0.62
HCFC2-201ENST00000229330 APOBEC3AP31941 199 aaPredicted RBP11.21□□□□□ -0.62
HCFC2-201ENST00000229330 GPR179Q6PRD1 2367 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 PRB3Q04118 309 aaPredicted RBP11.2□□□□□ -0.62
HCFC2-201ENST00000229330 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 CITED1Q99966 193 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 IGKV3D-20A0A0C4DH25 116 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 SAP30O75446 220 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 CEND1Q8N111 149 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 WIPF2Q8TF74 440 aaPredicted RBP11.2□□□□□ -0.62
HCFC2-201ENST00000229330 EDA2RQ9HAV5 297 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 LINC01560Q8TB33 94 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 DUX5Q96PT3 197 aa11.2□□□□□ -0.62
HCFC2-201ENST00000229330 COLCA1Q6ZS62 124 aa11.19□□□□□ -0.62
HCFC2-201ENST00000229330 FAM57AQ8TBR7 257 aa11.19□□□□□ -0.62
HCFC2-201ENST00000229330 K7ERJ3 54 aa11.19□□□□□ -0.62
HCFC2-201ENST00000229330 PRSS46E5RG02 174 aa11.19□□□□□ -0.62
HCFC2-201ENST00000229330 LY6EQ16553 131 aa11.19□□□□□ -0.62
HCFC2-201ENST00000229330 C9orf153Q5TBE3 101 aa11.19□□□□□ -0.62
HCFC2-201ENST00000229330 TMEM75Q8N9X5 138 aa11.19□□□□□ -0.62
HCFC2-201ENST00000229330 TOMM7Q9P0U1 55 aa11.19□□□□□ -0.62
HCFC2-201ENST00000229330 ETV2O00321 342 aaPredicted RBP11.18□□□□□ -0.62
HCFC2-201ENST00000229330 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 HEATR5AQ86XA9 2040 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 DENND4AQ7Z401 1863 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 BSPH1Q075Z2 132 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 TAL2Q16559 108 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 IGHV1-46P01743 117 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 IFITM1P13164 125 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 NLRC5Q86WI3 1866 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 IGKV1D-17A0A075B6S4 117 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 IGLV3-1P01715 115 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 IGKV1-16P04430 117 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 B3GALT5-AS1P59052 145 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 ZCCHC24Q8N2G6 241 aaKnown RBP11.18□□□□□ -0.62
HCFC2-201ENST00000229330 SIGLEC8Q9NYZ4 499 aa11.18□□□□□ -0.62
HCFC2-201ENST00000229330 TIMM23O14925 209 aa11.17□□□□□ -0.62
HCFC2-201ENST00000229330 NPC2P61916 151 aa11.17□□□□□ -0.62
HCFC2-201ENST00000229330 MYMXA0A1B0GTQ4 84 aa11.17□□□□□ -0.62
HCFC2-201ENST00000229330 OVOL1O14753 267 aa11.17□□□□□ -0.62
HCFC2-201ENST00000229330 SPRR3Q9UBC9 169 aa11.17□□□□□ -0.62
HCFC2-201ENST00000229330 H3BMM0 161 aa11.17□□□□□ -0.62
HCFC2-201ENST00000229330 MRPL51Q4U2R6 128 aaKnown RBP11.17□□□□□ -0.62
HCFC2-201ENST00000229330 UBE2WQ96B02 151 aa11.17□□□□□ -0.62
HCFC2-201ENST00000229330 RSPO1Q2MKA7 263 aaPredicted RBP11.16□□□□□ -0.62
HCFC2-201ENST00000229330 TEX48A0A1B0GUV7 120 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 TMEM200BQ69YZ2 307 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 AMTNQ6UX39 209 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 Q8N8P6 123 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 ACACAQ13085 2346 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 PLXND1Q9Y4D7 1925 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 TRAV8-3A0A0A6YYJ7 113 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 VCYO14598 125 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 ZNF688P0C7X2 276 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 ASPHD1Q5U4P2 390 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 DOCK9Q9BZ29 2069 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 LMO1P25800 156 aa11.16□□□□□ -0.62
HCFC2-201ENST00000229330 COX6B1P14854 86 aa11.15□□□□□ -0.62
HCFC2-201ENST00000229330 TAX1BP3O14907 124 aa11.15□□□□□ -0.62
HCFC2-201ENST00000229330 MORN3Q6PF18 240 aaPredicted RBP11.15□□□□□ -0.62
HCFC2-201ENST00000229330 C1QTNF4Q9BXJ3 329 aa11.15□□□□□ -0.62
HCFC2-201ENST00000229330 LGALS1P09382 135 aaKnown RBP11.15□□□□□ -0.63
HCFC2-201ENST00000229330 PDE6HQ13956 83 aa11.15□□□□□ -0.63
HCFC2-201ENST00000229330 LYPD6Q86Y78 171 aa11.15□□□□□ -0.63
HCFC2-201ENST00000229330 WFDC12Q8WWY7 111 aa11.15□□□□□ -0.63
HCFC2-201ENST00000229330 FAM168AQ92567 244 aa11.15□□□□□ -0.63
HCFC2-201ENST00000229330 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.63
HCFC2-201ENST00000229330 C11orf68Q9H3H3 251 aaKnown RBP11.15□□□□□ -0.63
HCFC2-201ENST00000229330 SIGLEC15Q6ZMC9 328 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 PLXNA4Q9HCM2 1894 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 PI4KAP42356 2102 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 SLC25A16P16260 332 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 C12orf74Q32Q52 190 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 WNT2P09544 360 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 GAGE5Q13069 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 GAGE6Q13070 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 C14orf178Q8N769 122 aaPredicted RBP11.14□□□□□ -0.63
HCFC2-201ENST00000229330 GAGE12JA6NER3 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 GAGE7O76087 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 GAGE4Q13068 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 IGHV1-3A0A0C4DH29 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 IGHV1-8P0DP01 117 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 PRR20EP86478 221 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 PRR20CP86479 221 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 PRR20DP86480 221 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 PRR20BP86481 221 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 PRR20AP86496 221 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
HCFC2-201ENST00000229330 DOCK8Q8NF50 2099 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 788 ms