RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
MRPL28-201ENST00000199706 TMEM14CQ9P0S9 112 aa12.69□□□□□ -0.38
MRPL28-201ENST00000199706 A0A0J9YWU9 116 aa12.68□□□□□ -0.38
MRPL28-201ENST00000199706 C17orf112F2Z3M2 114 aa12.68□□□□□ -0.38
MRPL28-201ENST00000199706 GDF5OSQ5U4N7 250 aa12.68□□□□□ -0.38
MRPL28-201ENST00000199706 MORN5Q5VZ52 161 aa12.68□□□□□ -0.38
MRPL28-201ENST00000199706 DUSP14O95147 198 aaKnown RBP12.67□□□□□ -0.38
MRPL28-201ENST00000199706 MIFP14174 115 aa12.67□□□□□ -0.38
MRPL28-201ENST00000199706 AQP10Q96PS8 301 aa12.67□□□□□ -0.38
MRPL28-201ENST00000199706 MRPL32Q9BYC8 188 aaKnown RBP12.67□□□□□ -0.38
MRPL28-201ENST00000199706 ZNF331Q9NQX6 463 aaPredicted RBP12.67□□□□□ -0.38
MRPL28-201ENST00000199706 IFNA5P01569 189 aa12.66□□□□□ -0.38
MRPL28-201ENST00000199706 PSG9Q00887 426 aa12.66□□□□□ -0.38
MRPL28-201ENST00000199706 PDE6HQ13956 83 aa12.66□□□□□ -0.38
MRPL28-201ENST00000199706 Q8NAQ8 132 aa12.66□□□□□ -0.38
MRPL28-201ENST00000199706 AMBPP02760 352 aa12.65□□□□□ -0.38
MRPL28-201ENST00000199706 PSG3Q16557 428 aa12.65□□□□□ -0.38
MRPL28-201ENST00000199706 FAM78BQ5VT40 261 aa12.65□□□□□ -0.38
MRPL28-201ENST00000199706 AMTNQ6UX39 209 aa12.65□□□□□ -0.38
MRPL28-201ENST00000199706 ZNF705AQ6ZN79 300 aaPredicted RBP12.65□□□□□ -0.38
MRPL28-201ENST00000199706 SAT2Q96F10 170 aaPredicted RBP12.65□□□□□ -0.38
MRPL28-201ENST00000199706 NEU1Q99519 415 aa12.65□□□□□ -0.38
MRPL28-201ENST00000199706 DEFB1P60022 68 aa12.64□□□□□ -0.39
MRPL28-201ENST00000199706 ZNF266Q14584 549 aa12.64□□□□□ -0.39
MRPL28-201ENST00000199706 ZNF738Q8NE65 137 aa12.64□□□□□ -0.39
MRPL28-201ENST00000199706 LRRC20Q8TCA0 184 aa12.64□□□□□ -0.39
MRPL28-201ENST00000199706 SCGB1C1Q8TD33 95 aa12.64□□□□□ -0.39
MRPL28-201ENST00000199706 MRPL53Q96EL3 112 aaKnown RBP12.64□□□□□ -0.39
MRPL28-201ENST00000199706 TIMM9Q9Y5J7 89 aa12.64□□□□□ -0.39
MRPL28-201ENST00000199706 X6R8D5 127 aa12.64□□□□□ -0.39
MRPL28-201ENST00000199706 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
MRPL28-201ENST00000199706 F6UB75 175 aa12.63□□□□□ -0.39
MRPL28-201ENST00000199706 H3BQ15 152 aa12.63□□□□□ -0.39
MRPL28-201ENST00000199706 ZNF705DP0CH99 300 aaPredicted RBP12.63□□□□□ -0.39
MRPL28-201ENST00000199706 ZNF705BP0CI00 300 aaPredicted RBP12.63□□□□□ -0.39
MRPL28-201ENST00000199706 HIST1H1EP10412 219 aaKnown RBP12.63□□□□□ -0.39
MRPL28-201ENST00000199706 CNN1P51911 297 aaKnown RBP12.63□□□□□ -0.39
MRPL28-201ENST00000199706 RNF182Q8N6D2 247 aa12.63□□□□□ -0.39
MRPL28-201ENST00000199706 OR4B1Q8NGF8 309 aa12.63□□□□□ -0.39
MRPL28-201ENST00000199706 OR8A1Q8NGG7 326 aa12.63□□□□□ -0.39
MRPL28-201ENST00000199706 XCL2Q9UBD3 114 aa12.63□□□□□ -0.39
MRPL28-201ENST00000199706 DYNC2H1Q8NCM8 4307 aaKnown RBP12.62□□□□□ -0.39
MRPL28-201ENST00000199706 TRBV19A0A075B6N1 114 aa12.62□□□□□ -0.39
MRPL28-201ENST00000199706 TRAV5A0A0B4J249 113 aa12.62□□□□□ -0.39
MRPL28-201ENST00000199706 SMIM9A6NGZ8 99 aa12.62□□□□□ -0.39
MRPL28-201ENST00000199706 GCSAMLQ5JQS6 135 aa12.62□□□□□ -0.39
MRPL28-201ENST00000199706 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
MRPL28-201ENST00000199706 MFFQ9GZY8 342 aa12.62□□□□□ -0.39
MRPL28-201ENST00000199706 SLC17A3O00476 420 aa12.61□□□□□ -0.39
MRPL28-201ENST00000199706 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
MRPL28-201ENST00000199706 RPUSD4Q96CM3 377 aaKnown RBP12.61□□□□□ -0.39
MRPL28-201ENST00000199706 SLC25A2Q9BXI2 301 aa12.61□□□□□ -0.39
MRPL28-201ENST00000199706 SMIM3Q9BZL3 60 aa12.61□□□□□ -0.39
MRPL28-201ENST00000199706 WFDC1Q9HC57 220 aa12.61□□□□□ -0.39
MRPL28-201ENST00000199706 ZNF586Q9NXT0 402 aa12.61□□□□□ -0.39
MRPL28-201ENST00000199706 FUT9Q9Y231 359 aa12.61□□□□□ -0.39
MRPL28-201ENST00000199706 PRELID1Q9Y255 219 aa12.61□□□□□ -0.39
MRPL28-201ENST00000199706 IGHV4-28A0A0C4DH34 117 aa12.6□□□□□ -0.39
MRPL28-201ENST00000199706 NUPR2A6NF83 97 aa12.6□□□□□ -0.39
MRPL28-201ENST00000199706 ZFAND6Q6FIF0 208 aa12.6□□□□□ -0.39
MRPL28-201ENST00000199706 INO80EQ8NBZ0 244 aaPredicted RBP12.6□□□□□ -0.39
MRPL28-201ENST00000199706 OR2T35Q8NGX2 323 aa12.6□□□□□ -0.39
MRPL28-201ENST00000199706 IGF2BP2-AS1Q96M15 143 aa12.6□□□□□ -0.39
MRPL28-201ENST00000199706 SLC35B3Q9H1N7 401 aa12.6□□□□□ -0.39
MRPL28-201ENST00000199706 LYSTQ99698 3801 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 BOLA2-SMG1P6H3BVE0 249 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 IGKV3-20P01619 116 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 RHOBP62745 196 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 FFAR4Q5NUL3 377 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 MIR17HGQ75NE6 70 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 OR2G3Q8NGZ4 309 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 ODF3Q96PU9 254 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 PSMG3Q9BT73 122 aaPredicted RBP12.59□□□□□ -0.39
MRPL28-201ENST00000199706 TNFSF18Q9UNG2 199 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 GOLT1BQ9Y3E0 138 aa12.59□□□□□ -0.39
MRPL28-201ENST00000199706 TMEM189A5PLL7 270 aa12.58□□□□□ -0.4
MRPL28-201ENST00000199706 RNF222A6NCQ9 220 aa12.58□□□□□ -0.4
MRPL28-201ENST00000199706 NDUFB4O95168 129 aa12.58□□□□□ -0.4
MRPL28-201ENST00000199706 RBMY1A1P0DJD3 496 aaKnown RBP12.58□□□□□ -0.4
MRPL28-201ENST00000199706 RBMY1CP0DJD4 496 aa12.58□□□□□ -0.4
MRPL28-201ENST00000199706 HLA-DMBP28068 263 aa12.58□□□□□ -0.4
MRPL28-201ENST00000199706 TAS2R45P59539 299 aa12.58□□□□□ -0.4
MRPL28-201ENST00000199706 RBMY1FQ15415 496 aaKnown RBP12.58□□□□□ -0.4
MRPL28-201ENST00000199706 Q5BKY6 102 aa12.58□□□□□ -0.4
MRPL28-201ENST00000199706 G3V3Q6 166 aa12.57□□□□□ -0.4
MRPL28-201ENST00000199706 INSP01308 110 aa12.57□□□□□ -0.4
MRPL28-201ENST00000199706 M6PRP20645 277 aa12.57□□□□□ -0.4
MRPL28-201ENST00000199706 HIST1H1AQ02539 215 aaPredicted RBP12.57□□□□□ -0.4
MRPL28-201ENST00000199706 ACOT6Q3I5F7 207 aaPredicted RBP12.57□□□□□ -0.4
MRPL28-201ENST00000199706 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
MRPL28-201ENST00000199706 C11orf45Q8TAV5 145 aa12.57□□□□□ -0.4
MRPL28-201ENST00000199706 FXYD5Q96DB9 178 aa12.57□□□□□ -0.4
MRPL28-201ENST00000199706 OR51M1Q9H341 326 aa12.57□□□□□ -0.4
MRPL28-201ENST00000199706 CXorf65A6NEN9 183 aa12.56□□□□□ -0.4
MRPL28-201ENST00000199706 CRXO43186 299 aaPredicted RBP12.56□□□□□ -0.4
MRPL28-201ENST00000199706 PYYP10082 97 aa12.56□□□□□ -0.4
MRPL28-201ENST00000199706 LYPD1Q8N2G4 141 aa12.56□□□□□ -0.4
MRPL28-201ENST00000199706 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
MRPL28-201ENST00000199706 OR10J6PQ8NGY7 276 aa12.56□□□□□ -0.4
MRPL28-201ENST00000199706 C20orf144Q9BQM9 153 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms