RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 SDK1Q7Z5N4 2213 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 PCM1Q15154 2024 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 IGKV1-6A0A0C4DH72 117 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 HBDP02042 147 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 IGKV1-16P04430 117 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 HOXD3P31249 432 aaPredicted RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 SEC11AP67812 179 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 FAM120AOSQ5T036 256 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 THAP8Q8NA92 274 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 Q8NFD4 153 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 RNASE7Q9H1E1 156 aaKnown RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 VSIRQ9H7M9 311 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 TRAV12-3A0A0B4J271 114 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 USP17L23D6RBM5 183 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 H3BRN7 92 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 VCYO14598 125 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 HILS1P60008 231 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 IFITM2Q01629 132 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 MST1LQ2TV78 715 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 KIAA1644Q3SXP7 199 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 TMEM170AQ8WVE7 144 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 ZNF492Q9P255 531 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 CHTOPQ9Y3Y2 248 aaKnown RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 IGHV7-4-1A0A0J9YVY3 117 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 A0A1W2PNU3 283 aaPredicted RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 SMIM13P0DJ93 91 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 POU2AF1Q16633 256 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 DEFB112Q30KQ8 113 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 KLF17Q5JT82 389 aaPredicted RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 COL5A1-AS1Q5SY13 56 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 IL17RELQ6ZVW7 336 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 MAPK1IP1LQ8NDC0 245 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 OR13C6PQ8NH95 151 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 PIKFYVEQ9Y2I7 2098 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 SRRM4A7MD48 611 aaKnown RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 IGHV4-39P01824 125 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 LGALS1P09382 135 aaKnown RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 GCSAMLQ5JQS6 135 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 EXOC3-AS1Q8N2X6 119 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 OCC1Q8TAD7 63 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 CCDC88CQ9P219 2028 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 PRB1P04280 392 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 DEFB131AP59861 70 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TMEM249Q2WGJ8 235 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 IL17DQ8TAD2 202 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TMEM158Q8WZ71 300 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 RMI2Q96E14 147 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ZNF581Q9P0T4 197 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 UNC13CQ8NB66 2214 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 APOMO95445 188 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 RSPO1Q2MKA7 263 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 MORN3Q6PF18 240 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 Q86TA4 180 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 C11orf53Q8IXP5 236 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 MRPL53Q96EL3 112 aaKnown RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 SPXQ9BT56 116 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 DPM2O94777 84 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ZNF25P17030 456 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 DAD1P61803 113 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ZNF114Q8NC26 417 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 OR5A1Q8NGJ0 315 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ZNF524Q96C55 264 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 C1orf147Q96MC9 270 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 A0A087WX48 190 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 PSCAO43653 123 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 NDUFS6O75380 124 aaKnown RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 DNAL4O96015 105 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ERCC8Q13216 396 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 RASL10AQ92737 203 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 IGHV4-30-2A0A087WSY4 118 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 SLC25A20O43772 301 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 LINC00614P0C842 121 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 FOXA3P55318 350 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 SS18Q15532 418 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TCTEX1D4Q5JR98 221 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 DUX4L9Q6RFH8 374 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 LYZL1Q6UWQ5 148 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 RNF182Q8N6D2 247 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 PKIGQ9Y2B9 76 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 FANCMQ8IYD8 2048 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 IGHV4-61A0A0C4DH41 118 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 MUC21A0A0G2JKD1 596 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 MUC21A0A140T8X8 626 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 A8MWV9 139 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 H7C2G1 150 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 PAX9P55771 341 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 FXYD7P58549 80 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 LOXL1Q08397 574 aaPredicted RBP3.37□□□□□ -1.87
CFTR-201ENST00000003084 SLAQ13239 276 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 FOXI2Q6ZQN5 318 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 ATP6V0BQ99437 205 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 KIAA1549LQ6ZVL6 1849 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 ATRXP46100 2492 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 ABCA7Q8IZY2 2146 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 NDUFA3O95167 84 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 PRSS57Q6UWY2 283 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 PLEKHB2Q96CS7 222 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 C18orf15Q96N68 181 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms