RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 PRR30Q53SZ7 412 aaPredicted RBP13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 ATP5L2Q7Z4Y8 100 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 C8orf46Q8TAG6 207 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 FMC1Q96HJ9 113 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 PRSS22Q9GZN4 317 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 C19orf71A6NCJ1 209 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 CCL25O15444 150 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 LEPROTL1O95214 131 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 LINC00614P0C842 121 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 WNK2Q9Y3S1 2297 aa13.16□□□□□ -0.3
HNRNPU-228ENST00000640306 C20orf202A1L168 122 aa13.15□□□□□ -0.3
HNRNPU-228ENST00000640306 TNFRSF13BO14836 293 aaPredicted RBP13.15□□□□□ -0.3
HNRNPU-228ENST00000640306 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
HNRNPU-228ENST00000640306 SLC25A39Q9BZJ4 359 aaPredicted RBP13.15□□□□□ -0.3
HNRNPU-228ENST00000640306 IGHV1-3A0A0C4DH29 117 aa13.15□□□□□ -0.3
HNRNPU-228ENST00000640306 KLF17Q5JT82 389 aaPredicted RBP13.15□□□□□ -0.3
HNRNPU-228ENST00000640306 GFRALQ6UXV0 394 aa13.15□□□□□ -0.3
HNRNPU-228ENST00000640306 Q86TA4 180 aa13.15□□□□□ -0.3
HNRNPU-228ENST00000640306 SRSF12Q8WXF0 261 aaKnown RBP13.15□□□□□ -0.3
HNRNPU-228ENST00000640306 PTPRQQ9UMZ3 2332 aa13.14□□□□□ -0.31
HNRNPU-228ENST00000640306 IGHV1-69-2A0A0G2JMI3 117 aa13.14□□□□□ -0.31
HNRNPU-228ENST00000640306 TEX22C9J3V5 150 aa13.14□□□□□ -0.31
HNRNPU-228ENST00000640306 TEX45Q8NA69 505 aa13.14□□□□□ -0.31
HNRNPU-228ENST00000640306 F11RQ9Y624 299 aaKnown RBP13.14□□□□□ -0.31
HNRNPU-228ENST00000640306 CNIH1O95406 144 aa13.14□□□□□ -0.31
HNRNPU-228ENST00000640306 IGLC1P0CG04 106 aa13.14□□□□□ -0.31
HNRNPU-228ENST00000640306 OR4F17Q8NGA8 305 aa13.14□□□□□ -0.31
HNRNPU-228ENST00000640306 RASL11BQ9BPW5 248 aa13.14□□□□□ -0.31
HNRNPU-228ENST00000640306 MUC21A0A0G2JKD1 596 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 MUC21A0A140T8X8 626 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 MUC21Q5SSG8 566 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 FAM71F2Q6NXP2 309 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 NCOR2Q9Y618 2525 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 SYS1-DBNDD2H3BUS1 97 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 M0R3E3 92 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 ARMS2P0C7Q2 107 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 HTR1DP28221 377 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 BCL6BQ8N143 479 aaPredicted RBP13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 RPEQ96AT9 228 aa13.13□□□□□ -0.31
HNRNPU-228ENST00000640306 TMSB15BA0A087X1C1 80 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 LY6HO94772 140 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 MPV17L2Q567V2 206 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 TMUB1Q9BVT8 246 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 CHD8Q9HCK8 2581 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 LOC102724200A0A096LPH7 203 aaPredicted RBP13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 SHISA9B4DS77 424 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 TCTAP57738 103 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 MRPS16Q9Y3D3 137 aaKnown RBP13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 IGLV2-11P01706 119 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 HILPDAQ9Y5L2 63 aa13.12□□□□□ -0.31
HNRNPU-228ENST00000640306 BUB1B-PAK6H3BSN5 160 aa13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 SNAI2O43623 268 aa13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 IGKV1-17P01599 117 aa13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 RBM14Q96PK6 669 aaKnown RBP13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 ANKHD1Q8IWZ3 2542 aaKnown RBP13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 IGLV1-47P01700 117 aa13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 CRYGBP07316 175 aa13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 OTORQ9NRC9 128 aa13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 RALYQ9UKM9 306 aaKnown RBP13.11□□□□□ -0.31
HNRNPU-228ENST00000640306 VSTM5A8MXK1 200 aa13.1□□□□□ -0.31
HNRNPU-228ENST00000640306 ZNF492Q9P255 531 aa13.1□□□□□ -0.31
HNRNPU-228ENST00000640306 ONECUT1Q9UBC0 465 aa13.1□□□□□ -0.31
HNRNPU-228ENST00000640306 COX11Q9Y6N1 276 aa13.1□□□□□ -0.31
HNRNPU-228ENST00000640306 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
HNRNPU-228ENST00000640306 LDLRAD2Q5SZI1 272 aa13.1□□□□□ -0.31
HNRNPU-228ENST00000640306 C8orf31Q8N9H6 132 aa13.1□□□□□ -0.31
HNRNPU-228ENST00000640306 LINC01560Q8TB33 94 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 PPIAL4CA0A0B4J2A2 164 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 I3L2K1 104 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 NUDT3O95989 172 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 IL4P05112 153 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 PPIAL4GP0DN37 164 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 FXYD7P58549 80 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 MUC15Q8N387 334 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 ZNF738Q8NE65 137 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 TIMM23O14925 209 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 FCGR2BP31994 310 aaPredicted RBP13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 KAAG1Q9UBP8 84 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 RAXQ9Y2V3 346 aa13.09□□□□□ -0.31
HNRNPU-228ENST00000640306 LOC389332A0A1B0GUA5 103 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 CT83Q5H943 113 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 RNASE8Q8TDE3 154 aaKnown RBP13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 SMIM12Q96EX1 92 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 NGBQ9NPG2 151 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 IGHV3-23P01764 117 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 APOHP02749 345 aaPredicted RBP13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 FAM106CPP0CH98 169 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 FAM106AQ4KMX7 169 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 Q8NA96 180 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 ORAOV1Q8WV07 137 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 C8orf49Q96NF6 230 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 MSRB2Q9Y3D2 182 aa13.08□□□□□ -0.32
HNRNPU-228ENST00000640306 IGHV3OR16-8A0A075B7F1 116 aa13.07□□□□□ -0.32
HNRNPU-228ENST00000640306 SERTM2A0A1B0GWG4 89 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms