RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 IL15RAQ13261 267 aa12.85□□□□□ -0.35
PTPN11-207ENST00000639857 EBLN2Q6P2I7 272 aa12.85□□□□□ -0.35
PTPN11-207ENST00000639857 C16orf92Q96LL3 132 aa12.85□□□□□ -0.35
PTPN11-207ENST00000639857 RSG1Q9BU20 258 aa12.85□□□□□ -0.35
PTPN11-207ENST00000639857 LYRM2Q9NU23 88 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-207ENST00000639857 X6R8D5 127 aa12.85□□□□□ -0.35
PTPN11-207ENST00000639857 GOSR2O14653 212 aa12.84□□□□□ -0.35
PTPN11-207ENST00000639857 AGPAT2O15120 278 aa12.84□□□□□ -0.35
PTPN11-207ENST00000639857 PRAF2O60831 178 aa12.84□□□□□ -0.35
PTPN11-207ENST00000639857 OR5G3P0C626 314 aa12.84□□□□□ -0.35
PTPN11-207ENST00000639857 BCAP31P51572 246 aa12.84□□□□□ -0.35
PTPN11-207ENST00000639857 GDF5OSQ5U4N7 250 aa12.84□□□□□ -0.35
PTPN11-207ENST00000639857 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.84□□□□□ -0.35
PTPN11-207ENST00000639857 PHLDA1Q8WV24 401 aaPredicted RBP12.84□□□□□ -0.35
PTPN11-207ENST00000639857 DOK5Q9P104 306 aa12.84□□□□□ -0.35
PTPN11-207ENST00000639857 A0A087X0K7 114 aa12.83□□□□□ -0.36
PTPN11-207ENST00000639857 IGHV4-28A0A0C4DH34 117 aa12.83□□□□□ -0.36
PTPN11-207ENST00000639857 RAB31Q13636 194 aa12.83□□□□□ -0.36
PTPN11-207ENST00000639857 C17orf77Q96MU5 243 aa12.83□□□□□ -0.36
PTPN11-207ENST00000639857 ARL6Q9H0F7 186 aa12.83□□□□□ -0.36
PTPN11-207ENST00000639857 CLEC5AQ9NY25 188 aa12.83□□□□□ -0.36
PTPN11-207ENST00000639857 A0A0J9YX75 114 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 A8MTW9 85 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 SULT1A1P50225 295 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 DEFA1P59665 94 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 DEFA3P59666 94 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 S100A10P60903 97 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 HBG1P69891 147 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 HBG2P69892 147 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 IFITM3Q01628 133 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 RAB32Q13637 225 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 VWC2Q2TAL6 325 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 ZNF705AQ6ZN79 300 aaPredicted RBP12.82□□□□□ -0.36
PTPN11-207ENST00000639857 STX12Q86Y82 276 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 LINC00476Q8WZB0 136 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 NEU1Q99519 415 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 ARV1Q9H2C2 271 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 UQCC1Q9NVA1 299 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 XCL2Q9UBD3 114 aa12.82□□□□□ -0.36
PTPN11-207ENST00000639857 ELOA3CA0A087WX78 387 aaPredicted RBP12.81□□□□□ -0.36
PTPN11-207ENST00000639857 SMIM9A6NGZ8 99 aa12.81□□□□□ -0.36
PTPN11-207ENST00000639857 C11orf94C9JXX5 98 aa12.81□□□□□ -0.36
PTPN11-207ENST00000639857 RBMY1A1P0DJD3 496 aaKnown RBP12.81□□□□□ -0.36
PTPN11-207ENST00000639857 RBMY1CP0DJD4 496 aa12.81□□□□□ -0.36
PTPN11-207ENST00000639857 S100A11P31949 105 aa12.81□□□□□ -0.36
PTPN11-207ENST00000639857 NANOS2P60321 138 aaKnown RBP12.81□□□□□ -0.36
PTPN11-207ENST00000639857 RBMY1FQ15415 496 aaKnown RBP12.81□□□□□ -0.36
PTPN11-207ENST00000639857 NRARPQ7Z6K4 114 aa12.81□□□□□ -0.36
PTPN11-207ENST00000639857 ZNF709Q8N972 641 aa12.81□□□□□ -0.36
PTPN11-207ENST00000639857 UHRF2Q96PU4 802 aa12.81□□□□□ -0.36
PTPN11-207ENST00000639857 MGST2Q99735 147 aa12.81□□□□□ -0.36
PTPN11-207ENST00000639857 WDR83OSQ9Y284 106 aa12.81□□□□□ -0.36
PTPN11-207ENST00000639857 DNAH1Q9P2D7 4330 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 FAM24AA6NFZ4 105 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 ZNF705FA8MVS1 300 aaPredicted RBP12.8□□□□□ -0.36
PTPN11-207ENST00000639857 DEFB4AO15263 64 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 CST7O76096 145 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 ZNF705DP0CH99 300 aaPredicted RBP12.8□□□□□ -0.36
PTPN11-207ENST00000639857 ZNF705BP0CI00 300 aaPredicted RBP12.8□□□□□ -0.36
PTPN11-207ENST00000639857 CXCL2P19875 107 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 TCTAP57738 103 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 PSG9Q00887 426 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 FAM78BQ5VT40 261 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 PATE2Q6UY27 113 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 TMEM252Q8N6L7 170 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 OR4B1Q8NGF8 309 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 C20orf173Q96LM9 149 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 MARVELD1Q9BSK0 173 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 NMES1Q9C002 83 aa12.8□□□□□ -0.36
PTPN11-207ENST00000639857 INMT-MINDY4F8WBC2 141 aa12.79□□□□□ -0.36
PTPN11-207ENST00000639857 COX7A2P2O60397 106 aa12.79□□□□□ -0.36
PTPN11-207ENST00000639857 DUSP14O95147 198 aaKnown RBP12.79□□□□□ -0.36
PTPN11-207ENST00000639857 CAMLGP49069 296 aa12.79□□□□□ -0.36
PTPN11-207ENST00000639857 DEFB1P60022 68 aa12.79□□□□□ -0.36
PTPN11-207ENST00000639857 CYCSP99999 105 aaKnown RBP12.79□□□□□ -0.36
PTPN11-207ENST00000639857 ATP6V1FQ16864 119 aa12.79□□□□□ -0.36
PTPN11-207ENST00000639857 Q6ZRG5 221 aa12.79□□□□□ -0.36
PTPN11-207ENST00000639857 LINC00305Q7Z4B0 112 aa12.79□□□□□ -0.36
PTPN11-207ENST00000639857 CHAC2Q8WUX2 184 aa12.79□□□□□ -0.36
PTPN11-207ENST00000639857 ALMS1Q8TCU4 4167 aa12.79□□□□□ -0.36
PTPN11-207ENST00000639857 TRAV8-2A0A0B4J237 113 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 MRPS12O15235 138 aaKnown RBP12.78□□□□□ -0.36
PTPN11-207ENST00000639857 MPDU1O75352 247 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 AMBPP02760 352 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 PRR20EP86478 221 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 PRR20CP86479 221 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 PRR20DP86480 221 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 PRR20BP86481 221 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 PRR20AP86496 221 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 LCN15Q6UWW0 184 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 PFDN5Q99471 154 aa12.78□□□□□ -0.36
PTPN11-207ENST00000639857 PLECQ15149 4684 aaKnown RBP12.78□□□□□ -0.36
PTPN11-207ENST00000639857 IGSF23A1L1A6 192 aa12.77□□□□□ -0.37
PTPN11-207ENST00000639857 F6UB75 175 aa12.77□□□□□ -0.37
PTPN11-207ENST00000639857 IGKV3-20P01619 116 aa12.77□□□□□ -0.37
PTPN11-207ENST00000639857 RLN2P04090 185 aa12.77□□□□□ -0.37
PTPN11-207ENST00000639857 FGL1Q08830 312 aa12.77□□□□□ -0.37
PTPN11-207ENST00000639857 C10orf113Q5VZT2 155 aa12.77□□□□□ -0.37
PTPN11-207ENST00000639857 BPIFA4PQ86YQ2 179 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms