RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 MED28Q9H204 178 aa15.99■□□□□ 0.15
SCN1B-206ENST00000638536 ATP6V1FQ16864 119 aa15.98■□□□□ 0.15
SCN1B-206ENST00000638536 THAP6Q8TBB0 222 aa15.98■□□□□ 0.15
SCN1B-206ENST00000638536 CSTL1Q9H114 145 aa15.98■□□□□ 0.15
SCN1B-206ENST00000638536 FGF7P21781 194 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 GDF5OSQ5U4N7 250 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 TRPT1Q86TN4 253 aaKnown RBP15.97■□□□□ 0.15
SCN1B-206ENST00000638536 STHQ8IWL8 128 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 KMT2CQ8NEZ4 4911 aaKnown RBP15.97■□□□□ 0.15
SCN1B-206ENST00000638536 GIG44P09565 113 aaPredicted RBP15.97■□□□□ 0.15
SCN1B-206ENST00000638536 SNRPD3P62318 126 aaKnown RBP15.97■□□□□ 0.15
SCN1B-206ENST00000638536 OPCMLQ14982 345 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 Q5BKY6 102 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 IGFL4Q6B9Z1 124 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 Q6ZWC4 215 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 LINC00305Q7Z4B0 112 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 C20orf173Q96LM9 149 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 LINC00052Q96N35 136 aa15.97■□□□□ 0.15
SCN1B-206ENST00000638536 SEPSECSQ9HD40 501 aaKnown RBP15.97■□□□□ 0.15
SCN1B-206ENST00000638536 GALR1P47211 349 aa15.96■□□□□ 0.15
SCN1B-206ENST00000638536 UBE2CO00762 179 aa15.95■□□□□ 0.14
SCN1B-206ENST00000638536 MRPS12O15235 138 aaKnown RBP15.95■□□□□ 0.14
SCN1B-206ENST00000638536 SNRPCP09234 159 aaKnown RBP15.95■□□□□ 0.14
SCN1B-206ENST00000638536 LYL1P12980 280 aa15.95■□□□□ 0.14
SCN1B-206ENST00000638536 RPL29P47914 159 aaKnown RBP15.95■□□□□ 0.14
SCN1B-206ENST00000638536 RAB31Q13636 194 aa15.95■□□□□ 0.14
SCN1B-206ENST00000638536 RNF183Q96D59 192 aa15.95■□□□□ 0.14
SCN1B-206ENST00000638536 SPRY2O43597 315 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 COX7A2P2O60397 106 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 PET100P0DJ07 73 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 RPL12P30050 165 aaKnown RBP15.94■□□□□ 0.14
SCN1B-206ENST00000638536 PXDC1Q5TGL8 231 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 CHAC2Q8WUX2 184 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 NPCDR1Q9BY65 106 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 SLC39A9Q9NUM3 307 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 HSPB11Q9Y547 144 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 PXMP4Q9Y6I8 212 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 TRAV8-2A0A0B4J237 113 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 TRAV5A0A0B4J249 113 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 CA1P00915 261 aaPredicted RBP15.94■□□□□ 0.14
SCN1B-206ENST00000638536 PSMB3P49720 205 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 B2MP61769 119 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 FGL1Q08830 312 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 GCSAMLQ5JQS6 135 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 GPR82Q96P67 336 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 SMIM3Q9BZL3 60 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 DNAJC4Q9NNZ3 241 aa15.94■□□□□ 0.14
SCN1B-206ENST00000638536 F6UB75 175 aa15.93■□□□□ 0.14
SCN1B-206ENST00000638536 ISLRO14498 428 aa15.93■□□□□ 0.14
SCN1B-206ENST00000638536 C4BPBP20851 252 aa15.93■□□□□ 0.14
SCN1B-206ENST00000638536 C10orf113Q5VZT2 155 aa15.93■□□□□ 0.14
SCN1B-206ENST00000638536 Q6ZRG5 221 aa15.93■□□□□ 0.14
SCN1B-206ENST00000638536 C16orf92Q96LL3 132 aa15.93■□□□□ 0.14
SCN1B-206ENST00000638536 WFDC1Q9HC57 220 aa15.93■□□□□ 0.14
SCN1B-206ENST00000638536 H3BMM0 161 aa15.92■□□□□ 0.14
SCN1B-206ENST00000638536 RPL7P18124 248 aaKnown RBP15.92■□□□□ 0.14
SCN1B-206ENST00000638536 ID1P41134 155 aa15.92■□□□□ 0.14
SCN1B-206ENST00000638536 RNF182Q8N6D2 247 aa15.92■□□□□ 0.14
SCN1B-206ENST00000638536 WDR61Q9GZS3 305 aaKnown RBP15.92■□□□□ 0.14
SCN1B-206ENST00000638536 TP53TG1Q9Y2A0 90 aa15.92■□□□□ 0.14
SCN1B-206ENST00000638536 ELOA3CA0A087WX78 387 aaPredicted RBP15.91■□□□□ 0.14
SCN1B-206ENST00000638536 PRB4P10163 310 aaPredicted RBP15.91■□□□□ 0.14
SCN1B-206ENST00000638536 HLA-DMBP28068 263 aa15.91■□□□□ 0.14
SCN1B-206ENST00000638536 S100A7P31151 101 aa15.91■□□□□ 0.14
SCN1B-206ENST00000638536 TENM2Q9NT68 2774 aa15.91■□□□□ 0.14
SCN1B-206ENST00000638536 MPDU1O75352 247 aa15.9■□□□□ 0.14
SCN1B-206ENST00000638536 ATF4P18848 351 aaPredicted RBP15.9■□□□□ 0.14
SCN1B-206ENST00000638536 MEOX2P50222 304 aa15.9■□□□□ 0.14
SCN1B-206ENST00000638536 MUC7Q8TAX7 377 aa15.9■□□□□ 0.14
SCN1B-206ENST00000638536 ATP5SQ99766 215 aa15.9■□□□□ 0.14
SCN1B-206ENST00000638536 SAV1Q9H4B6 383 aaPredicted RBP15.9■□□□□ 0.14
SCN1B-206ENST00000638536 RFNGQ9Y644 331 aa15.9■□□□□ 0.14
SCN1B-206ENST00000638536 H3BTX0 84 aa15.9■□□□□ 0.14
SCN1B-206ENST00000638536 IGKV3-20P01619 116 aa15.9■□□□□ 0.14
SCN1B-206ENST00000638536 HLA-DRB4P13762 266 aa15.9■□□□□ 0.14
SCN1B-206ENST00000638536 HLA-DRB4X5D2U9 266 aa15.9■□□□□ 0.14
SCN1B-206ENST00000638536 A0A087X0K7 114 aa15.89■□□□□ 0.13
SCN1B-206ENST00000638536 CLEC5AQ9NY25 188 aa15.89■□□□□ 0.13
SCN1B-206ENST00000638536 GIPP09681 153 aaPredicted RBP15.88■□□□□ 0.13
SCN1B-206ENST00000638536 SPATA31B1PQ5VZV4 182 aa15.88■□□□□ 0.13
SCN1B-206ENST00000638536 OR1L4Q8NGR5 311 aa15.88■□□□□ 0.13
SCN1B-206ENST00000638536 H3BQ15 152 aa15.87■□□□□ 0.13
SCN1B-206ENST00000638536 FOXI2Q6ZQN5 318 aa15.87■□□□□ 0.13
SCN1B-206ENST00000638536 S100A7AQ86SG5 101 aa15.87■□□□□ 0.13
SCN1B-206ENST00000638536 A0A0J9YWU9 116 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 G3V3Q6 166 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 ZNF705DP0CH99 300 aaPredicted RBP15.86■□□□□ 0.13
SCN1B-206ENST00000638536 ZNF705BP0CI00 300 aaPredicted RBP15.86■□□□□ 0.13
SCN1B-206ENST00000638536 SPP1P10451 314 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 FXYD7P58549 80 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 BPIFA4PQ86YQ2 179 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 CSNK1G2-AS1Q8NCQ2 148 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 PFDN5Q99471 154 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 A0A0J9YX75 114 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 SLC17A3O00476 420 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 IGLC2P0DOY2 106 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 MORN3Q6PF18 240 aaPredicted RBP15.86■□□□□ 0.13
SCN1B-206ENST00000638536 OR11H2Q8NH07 326 aa15.86■□□□□ 0.13
SCN1B-206ENST00000638536 RARRES2Q99969 163 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms