RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 VN1R17PQ8TDU5 208 aa12.93□□□□□ -0.34
CTSD-213ENST00000637915 PACRGQ96M98 296 aaPredicted RBP12.93□□□□□ -0.34
CTSD-213ENST00000637915 TXN2Q99757 166 aa12.93□□□□□ -0.34
CTSD-213ENST00000637915 MRPL18Q9H0U6 180 aaKnown RBP12.93□□□□□ -0.34
CTSD-213ENST00000637915 GATCO43716 136 aaKnown RBP12.92□□□□□ -0.34
CTSD-213ENST00000637915 SPINK4O60575 86 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 SLC35B1P78383 322 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 SIGLEC15Q6ZMC9 328 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 S100A7AQ86SG5 101 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 TMEM219Q86XT9 240 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 PIFOQ8TCI5 191 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 NRGNQ92686 78 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 CHRDL1Q9BU40 450 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 GNB1LQ9BYB4 327 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 TRBV9A0A0B4J1U6 114 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 SNURFLB1AK76 121 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 G3V318 75 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 AMBPP02760 352 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 IGHV4-38-2P0DP08 117 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 C15orf32Q32M92 178 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 CMTM2Q8TAZ6 248 aa12.92□□□□□ -0.34
CTSD-213ENST00000637915 SCGB2A1O75556 95 aa12.91□□□□□ -0.34
CTSD-213ENST00000637915 RHOGP84095 191 aa12.91□□□□□ -0.34
CTSD-213ENST00000637915 RPL19P84098 196 aaKnown RBP12.91□□□□□ -0.34
CTSD-213ENST00000637915 ZNF502Q8TBZ5 544 aa12.91□□□□□ -0.34
CTSD-213ENST00000637915 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
CTSD-213ENST00000637915 GRAMD2BQ96HH9 432 aa12.91□□□□□ -0.34
CTSD-213ENST00000637915 ZNF414Q96IQ9 312 aa12.91□□□□□ -0.34
CTSD-213ENST00000637915 MOB4Q9Y3A3 225 aa12.91□□□□□ -0.34
CTSD-213ENST00000637915 ZFYVE26Q68DK2 2539 aa12.91□□□□□ -0.34
CTSD-213ENST00000637915 TRAV8-1A0A0A6YYK1 113 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 IGLV2-11P01706 119 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 MSMBP08118 114 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 GOLT1AQ6ZVE7 132 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 Q86TA4 180 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 LYPD1Q8N2G4 141 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 MEGF9Q9H1U4 602 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 CSMD2Q7Z408 3487 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 UBR5O95071 2799 aaPredicted RBP12.9□□□□□ -0.34
CTSD-213ENST00000637915 IZUMO1RA6ND01 250 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 AMY1AP04745 511 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 GPR183P32249 361 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 LINC00322Q6ZN03 302 aaPredicted RBP12.9□□□□□ -0.34
CTSD-213ENST00000637915 ZNF843Q8N446 348 aa12.9□□□□□ -0.34
CTSD-213ENST00000637915 ZNF462Q96JM2 2506 aa12.89□□□□□ -0.35
CTSD-213ENST00000637915 A0A1B0GUS0 222 aa12.89□□□□□ -0.35
CTSD-213ENST00000637915 MRPL54Q6P161 138 aaKnown RBP12.89□□□□□ -0.35
CTSD-213ENST00000637915 WDR73Q6P4I2 378 aa12.89□□□□□ -0.35
CTSD-213ENST00000637915 TMEM136Q6ZRR5 245 aa12.89□□□□□ -0.35
CTSD-213ENST00000637915 MT-ND6P03923 174 aa12.89□□□□□ -0.35
CTSD-213ENST00000637915 CDPF1Q6NVV7 123 aa12.89□□□□□ -0.35
CTSD-213ENST00000637915 GSN-AS1Q9NRJ2 163 aa12.89□□□□□ -0.35
CTSD-213ENST00000637915 GRIFINA4D1Z8 144 aa12.88□□□□□ -0.35
CTSD-213ENST00000637915 PAX1P15863 534 aa12.88□□□□□ -0.35
CTSD-213ENST00000637915 SRSF1Q07955 248 aaKnown RBP eCLIP12.88□□□□□ -0.35
CTSD-213ENST00000637915 PDE6HQ13956 83 aa12.88□□□□□ -0.35
CTSD-213ENST00000637915 COX19Q49B96 90 aa12.88□□□□□ -0.35
CTSD-213ENST00000637915 TSKUQ8WUA8 353 aa12.88□□□□□ -0.35
CTSD-213ENST00000637915 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
CTSD-213ENST00000637915 NAT8BQ9UHF3 227 aa12.88□□□□□ -0.35
CTSD-213ENST00000637915 RABAC1Q9UI14 185 aa12.88□□□□□ -0.35
CTSD-213ENST00000637915 SOX21Q9Y651 276 aaPredicted RBP12.88□□□□□ -0.35
CTSD-213ENST00000637915 TRBV6-1A0A0K0K1D8 114 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 C19orf71A6NCJ1 209 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 DSCR9P59020 149 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 PRNTQ86SH4 94 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 GBGT1Q8N5D6 347 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 NUP35Q8NFH5 326 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 CCDC140Q96MF4 163 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 PRSS22Q9GZN4 317 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 IGHV3-35A0A0C4DH35 117 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 CLEC3BP05452 202 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 C19orf54Q5BKX5 351 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 Q71RC1 249 aaPredicted RBP12.87□□□□□ -0.35
CTSD-213ENST00000637915 TMEM75Q8N9X5 138 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 MS4A10Q96PG2 267 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 NEU1Q99519 415 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 RPP21Q9H633 154 aaKnown RBP12.87□□□□□ -0.35
CTSD-213ENST00000637915 TP53TG3Q9ULZ0 132 aa12.87□□□□□ -0.35
CTSD-213ENST00000637915 SPG11Q96JI7 2443 aa12.86□□□□□ -0.35
CTSD-213ENST00000637915 MAP1AP78559 2803 aaPredicted RBP12.86□□□□□ -0.35
CTSD-213ENST00000637915 FBN2P35556 2912 aa12.86□□□□□ -0.35
CTSD-213ENST00000637915 B4DSR2 109 aa12.86□□□□□ -0.35
CTSD-213ENST00000637915 M0R3E3 92 aa12.86□□□□□ -0.35
CTSD-213ENST00000637915 BMPR1BO00238 502 aa12.86□□□□□ -0.35
CTSD-213ENST00000637915 CRISP2P16562 243 aa12.86□□□□□ -0.35
CTSD-213ENST00000637915 RPL7P18124 248 aaKnown RBP12.86□□□□□ -0.35
CTSD-213ENST00000637915 CIARTQ8N365 385 aaPredicted RBP12.86□□□□□ -0.35
CTSD-213ENST00000637915 TMEM18Q96B42 140 aa12.86□□□□□ -0.35
CTSD-213ENST00000637915 ZFAND3Q9H8U3 227 aa12.86□□□□□ -0.35
CTSD-213ENST00000637915 HIF1ANQ9NWT6 349 aa12.86□□□□□ -0.35
CTSD-213ENST00000637915 IGHV3OR16-8A0A075B7F1 116 aa12.85□□□□□ -0.35
CTSD-213ENST00000637915 TRAV41A0A0B4J266 112 aa12.85□□□□□ -0.35
CTSD-213ENST00000637915 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
CTSD-213ENST00000637915 DIRC3C9JPN6 131 aa12.85□□□□□ -0.35
CTSD-213ENST00000637915 NUPR1O60356 82 aa12.85□□□□□ -0.35
CTSD-213ENST00000637915 P01737 135 aa12.85□□□□□ -0.35
CTSD-213ENST00000637915 COX6B1P14854 86 aa12.85□□□□□ -0.35
CTSD-213ENST00000637915 CRIP2P52943 208 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms