RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 E9PLN8 166 aa13.41□□□□□ -0.26
CACNA1A-240ENST00000637432 IGKV1-39P01597 117 aa13.41□□□□□ -0.26
CACNA1A-240ENST00000637432 IGKV1D-39P04432 117 aa13.41□□□□□ -0.26
CACNA1A-240ENST00000637432 EFNA4P52798 201 aa13.41□□□□□ -0.26
CACNA1A-240ENST00000637432 TMEM200BQ69YZ2 307 aa13.41□□□□□ -0.26
CACNA1A-240ENST00000637432 ZNF837Q96EG3 531 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-240ENST00000637432 VCYO14598 125 aa13.41□□□□□ -0.26
CACNA1A-240ENST00000637432 SMKR1H3BMG3 65 aa13.4□□□□□ -0.26
CACNA1A-240ENST00000637432 SERF1AO75920 110 aa13.4□□□□□ -0.26
CACNA1A-240ENST00000637432 Q6ZQT7 251 aa13.4□□□□□ -0.26
CACNA1A-240ENST00000637432 TRAV12-2A0A075B6T6 113 aa13.4□□□□□ -0.26
CACNA1A-240ENST00000637432 ZFAND6Q6FIF0 208 aa13.4□□□□□ -0.26
CACNA1A-240ENST00000637432 RMI2Q96E14 147 aa13.4□□□□□ -0.26
CACNA1A-240ENST00000637432 TRBV25-1A0A075B6N4 114 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 A0A0G2JNJ9 132 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 MORN2Q502X0 79 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 C9orf153Q5TBE3 101 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 Q9UFV3 132 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A18PA6NE21 464 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A16PA6NEW6 464 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A9PA6NNJ1 464 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A5PA8MXJ8 464 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 RS1O15537 224 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A15PP0C7V4 464 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A14PP0C7W9 464 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 MPTX1A8MV57 137 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 EGR2P11161 476 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 SAMD5Q5TGI4 173 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 C20orf204Q6ZNR8 217 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 GAGE2BQ13066 116 aa13.39□□□□□ -0.27
CACNA1A-240ENST00000637432 F2Z2F3 143 aa13.38□□□□□ -0.27
CACNA1A-240ENST00000637432 LCTP09848 1927 aa13.38□□□□□ -0.27
CACNA1A-240ENST00000637432 SAA4P35542 130 aa13.38□□□□□ -0.27
CACNA1A-240ENST00000637432 SIGMAR1Q99720 223 aa13.38□□□□□ -0.27
CACNA1A-240ENST00000637432 D6R8Y8 96 aa13.38□□□□□ -0.27
CACNA1A-240ENST00000637432 RIPPLY2Q5TAB7 128 aa13.38□□□□□ -0.27
CACNA1A-240ENST00000637432 PVRIGQ6DKI7 326 aa13.38□□□□□ -0.27
CACNA1A-240ENST00000637432 FOXG1P55316 489 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 CHCHD2Q9Y6H1 151 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A7PA6NKC0 464 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A22PA8MWA6 464 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A12PA8MX19 464 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A23PA8MXZ1 464 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 SEC11AP67812 179 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 TIMM21Q9BVV7 248 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 VWA8A3KMH1 1905 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 BMPERQ8N8U9 685 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 RCC1LQ96I51 464 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 SBF2Q86WG5 1849 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 C14orf132Q9NPU4 83 aa13.37□□□□□ -0.27
CACNA1A-240ENST00000637432 RNASE13Q5GAN3 156 aaKnown RBP13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 ZNF319Q9P2F9 582 aa13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 LINC01619G3V211 115 aa13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 MAJINQ3KP22 176 aa13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 Q6AWC8 147 aa13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 ZNF503Q96F45 646 aa13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 BUB3O43684 328 aa13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 RBM38Q9H0Z9 239 aaKnown RBP13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 PPP1R3EQ9H7J1 279 aa13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 AHDC1Q5TGY3 1603 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 IQCF6A8MYZ5 107 aa13.36□□□□□ -0.27
CACNA1A-240ENST00000637432 UPK2O00526 184 aa13.35□□□□□ -0.27
CACNA1A-240ENST00000637432 IGHV1-46P01743 117 aa13.35□□□□□ -0.27
CACNA1A-240ENST00000637432 MGAMO43451 1857 aa13.35□□□□□ -0.27
CACNA1A-240ENST00000637432 SELLP14151 372 aa13.35□□□□□ -0.27
CACNA1A-240ENST00000637432 C10orf55Q5SWW7 151 aa13.35□□□□□ -0.27
CACNA1A-240ENST00000637432 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-240ENST00000637432 FAM90A20PA6NIJ5 464 aa13.35□□□□□ -0.27
CACNA1A-240ENST00000637432 XCL1P47992 114 aa13.35□□□□□ -0.27
CACNA1A-240ENST00000637432 IGLV1-36A0A0B4J1U3 117 aa13.34□□□□□ -0.27
CACNA1A-240ENST00000637432 C8orf31Q8N9H6 132 aa13.34□□□□□ -0.27
CACNA1A-240ENST00000637432 IFI27L1Q96BM0 104 aa13.34□□□□□ -0.27
CACNA1A-240ENST00000637432 TINCRA0A1B0GVN0 87 aa13.34□□□□□ -0.27
CACNA1A-240ENST00000637432 COX5BP10606 129 aa13.34□□□□□ -0.27
CACNA1A-240ENST00000637432 CITED1Q99966 193 aa13.34□□□□□ -0.27
CACNA1A-240ENST00000637432 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
CACNA1A-240ENST00000637432 MGST2Q99735 147 aa13.34□□□□□ -0.27
CACNA1A-240ENST00000637432 DANCRP0C864 163 aa13.34□□□□□ -0.27
CACNA1A-240ENST00000637432 IGHV1-3A0A0C4DH29 117 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 IGKV1D-12P01611 117 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 MALRD1Q5VYJ5 2156 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 C1QL4Q86Z23 238 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 SORL1Q92673 2214 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 SUPT4H1P63272 117 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 ESM1Q9NQ30 184 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 A0A1W2PPI3 338 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 COL8A2P25067 703 aa13.33□□□□□ -0.28
CACNA1A-240ENST00000637432 MYMXA0A1B0GTQ4 84 aa13.32□□□□□ -0.28
CACNA1A-240ENST00000637432 DUTP33316 252 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-240ENST00000637432 SOCS3O14543 225 aa13.32□□□□□ -0.28
CACNA1A-240ENST00000637432 MCRIP2Q9BUT9 160 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-240ENST00000637432 ZNF138P52744 262 aa13.32□□□□□ -0.28
CACNA1A-240ENST00000637432 CRLF1O75462 422 aa13.32□□□□□ -0.28
CACNA1A-240ENST00000637432 FSTP19883 344 aa13.32□□□□□ -0.28
CACNA1A-240ENST00000637432 ANKRD39Q53RE8 183 aa13.32□□□□□ -0.28
CACNA1A-240ENST00000637432 WFDC6Q9BQY6 131 aa13.32□□□□□ -0.28
CACNA1A-240ENST00000637432 HLA-DQB1P01920 261 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms