RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 NUDT2P50583 147 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 IQCJQ1A5X6 159 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 MRPL54Q6P161 138 aaKnown RBP3.59□□□□□ -1.83
SDCBP-213ENST00000630925 GPHB5Q86YW7 130 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 OR8D4Q8NGM9 314 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 MPLKIPQ8TAP9 179 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 STAG3L4Q8TBR4 150 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 SLC25A2Q9BXI2 301 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 CLEC7AQ9BXN2 247 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 PLA2G2FQ9BZM2 168 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 ATG5Q9H1Y0 275 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 CKLFQ9UBR5 152 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 CHCHD2Q9Y6H1 151 aaPredicted RBP3.59□□□□□ -1.83
SDCBP-213ENST00000630925 TRAV13-1A0A0B4J241 112 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 A0A0J9YW62 118 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 OR2T8A6NH00 312 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 LINC01548A6NM66 108 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 M0R129 80 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 PLA2G10O15496 165 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 LINC01565O15544 149 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 IGKV1-5P01602 117 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 CHTF8P0CG12 524 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 EIF5AP63241 154 aaKnown RBP3.59□□□□□ -1.83
SDCBP-213ENST00000630925 KHDC3LQ587J8 217 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 EIF5AL1Q6IS14 154 aaKnown RBP3.59□□□□□ -1.83
SDCBP-213ENST00000630925 PHF5AQ7RTV0 110 aaKnown RBP3.59□□□□□ -1.83
SDCBP-213ENST00000630925 KCNRGQ8N5I3 272 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 WFDC11Q8NEX6 87 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 OR5AK2Q8NH90 309 aa3.59□□□□□ -1.83
SDCBP-213ENST00000630925 MRPS24Q96EL2 167 aaKnown RBP3.59□□□□□ -1.83
SDCBP-213ENST00000630925 MRPS16Q9Y3D3 137 aaKnown RBP3.59□□□□□ -1.83
SDCBP-213ENST00000630925 ITPR3Q14573 2671 aa3.59□□□□□ -1.84
SDCBP-213ENST00000630925 MYH6P13533 1939 aa3.59□□□□□ -1.84
SDCBP-213ENST00000630925 DOCK2Q92608 1830 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 FREM2Q5SZK8 3169 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 IGKV6-21A0A0C4DH24 114 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 IGLV5-39A0A0G2JS06 123 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 CST7O76096 145 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 ARPP19P56211 112 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 FHL1Q13642 323 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 TDRG1Q3Y452 100 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 C19orf48Q6RUI8 117 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 ALKAL2Q6UX46 152 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF329Q86UD4 541 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF575Q86XF7 245 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 PCP2Q8IVA1 136 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 RNF182Q8N6D2 247 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 TMEM252Q8N6L7 170 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 LINC00526Q96FQ7 95 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 TBL1YQ9BQ87 522 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 OCR1Q9BZK8 76 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 HEXA-AS1Q9H8Q6 139 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 NPVFQ9HCQ7 196 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 C21orf62Q9NYP8 219 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 KLK13Q9UKR3 277 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 MYO5AQ9Y4I1 1855 aaKnown RBP3.58□□□□□ -1.84
SDCBP-213ENST00000630925 RPL37AP8A6NKH3 93 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF705GA8MUZ8 300 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-213ENST00000630925 G3V3Q6 166 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 NTN3O00634 580 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-213ENST00000630925 HLA-DPB1P04440 258 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF705DP0CH99 300 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-213ENST00000630925 PYYP10082 97 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 LGALS3P17931 250 aaKnown RBP3.58□□□□□ -1.84
SDCBP-213ENST00000630925 DEFA5Q01523 94 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 ICAM4Q14773 271 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 C10orf91Q5T1B1 145 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 UNQ5815/PRO19632Q6UWF5 114 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF645Q8N7E2 425 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 HYLS1Q96M11 299 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 S100A13Q99584 98 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 HDHD3Q9BSH5 251 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-213ENST00000630925 SND1-IT1Q9HBX3 110 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 KIAA1671Q9BY89 1806 aa3.58□□□□□ -1.84
SDCBP-213ENST00000630925 NUP205Q92621 2012 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 CHD3Q12873 2000 aaKnown RBP3.57□□□□□ -1.84
SDCBP-213ENST00000630925 NDUFC2-KCTD14E9PQ53 114 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 TMEM262E9PQX1 116 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 KRTAP4-16G5E9R7 235 aaPredicted RBP3.57□□□□□ -1.84
SDCBP-213ENST00000630925 H3BQ15 152 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 PEX7O00628 323 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 CXCL1P09341 107 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF90Q03938 601 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 PRR4Q16378 134 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 TEN1Q86WV5 123 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 OR4A5Q8NH83 315 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 OTOSQ8NHW6 89 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 PSMF1Q92530 271 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 RNASE6Q93091 150 aaKnown RBP3.57□□□□□ -1.84
SDCBP-213ENST00000630925 TIMM17AQ99595 171 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 AGPAT4-IT1Q9H0P7 198 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 SMCO4Q9NRQ5 59 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 MOB4Q9Y3A3 225 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 TICRRQ7Z2Z1 1910 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 NUP210LQ5VU65 1888 aa3.57□□□□□ -1.84
SDCBP-213ENST00000630925 TRAV12-2A0A075B6T6 113 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 IGHV3-16A0A0C4DH30 117 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 TMEM256-PLSCR3K7ERE1 68 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 UQCRQO14949 82 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 PITX3O75364 302 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 390.7 ms