RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 ZANQ9Y493 2812 aa1.86□□□□□ -2.11
VPS8-228ENST00000628962 MYH9P35579 1960 aaKnown RBP1.86□□□□□ -2.11
VPS8-228ENST00000628962 RP1P56715 2156 aa1.86□□□□□ -2.11
VPS8-228ENST00000628962 ZNF638Q14966 1978 aaKnown RBP1.85□□□□□ -2.11
VPS8-228ENST00000628962 CHD3Q12873 2000 aaKnown RBP1.85□□□□□ -2.11
VPS8-228ENST00000628962 IGLV2-18A0A075B6J9 118 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 A0A1B0GW54 56 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 TRAPPC13A5PLN9 417 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 A8MUN3 132 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 TSTD3H0UI37 97 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 H3BQ85 93 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 ERP29P30040 261 aaKnown RBP1.85□□□□□ -2.11
VPS8-228ENST00000628962 TBPL1P62380 186 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 OR8G1Q15617 311 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 TNFAIP8L3Q5GJ75 292 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 AKR1C8PQ5T2L2 129 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 IBA57Q5T440 356 aaKnown RBP1.85□□□□□ -2.11
VPS8-228ENST00000628962 KPRPQ5T749 579 aaPredicted RBP1.85□□□□□ -2.11
VPS8-228ENST00000628962 ZNF660Q6AZW8 331 aaPredicted RBP1.85□□□□□ -2.11
VPS8-228ENST00000628962 ZFAND6Q6FIF0 208 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 Q6ZS49 121 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 GPHB5Q86YW7 130 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 H1FOOQ8IZA3 346 aaPredicted RBP1.85□□□□□ -2.11
VPS8-228ENST00000628962 RPRMLQ8N4K4 120 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 ZFAND2AQ8N6M9 145 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 ZNF439Q8NDP4 499 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 OR10K1Q8NGX5 313 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 CCL4L1Q8NHW4 92 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 CD200R1Q8TD46 325 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 GPR146Q96CH1 333 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 RMND5BQ96G75 393 aaPredicted RBP1.85□□□□□ -2.11
VPS8-228ENST00000628962 NMNAT3Q96T66 252 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 SH3BGRL3Q9H299 93 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 CYTL1Q9NRR1 136 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 LYRM2Q9NU23 88 aaPredicted RBP1.85□□□□□ -2.11
VPS8-228ENST00000628962 PRNDQ9UKY0 176 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 LINC00588Q9Y4M8 146 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 TMEM56-RWDD3S4R434 201 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 VWFP04275 2813 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 HIVEP2P31629 2446 aa1.85□□□□□ -2.11
VPS8-228ENST00000628962 ABCA4P78363 2273 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 hCG_1818297A0A087WSY0 165 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 A0A1W2PQ67 120 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 A8MT66 165 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 C9JCJ5 164 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 G3V2T6 193 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 HMGB3O15347 200 aaKnown RBP1.84□□□□□ -2.11
VPS8-228ENST00000628962 MFSD11O43934 449 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 ZNF682O95780 498 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 C8GP07360 202 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 IGHV3-30-3P0DP02 117 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 SPI1P17947 270 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 PHBP35232 272 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 LINC00315P59091 139 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 DEFA1P59665 94 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 RHOBP62745 196 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 MOBPQ13875 183 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 MRPL51Q4U2R6 128 aaKnown RBP1.84□□□□□ -2.11
VPS8-228ENST00000628962 C12orf29Q8N999 325 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 TMEM35BQ8NCS4 154 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 OR13C8Q8NGS7 320 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 OR4K13Q8NH42 304 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 MRPL30Q8TCC3 161 aaKnown RBP1.84□□□□□ -2.11
VPS8-228ENST00000628962 GPR119Q8TDV5 335 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 ERMAPQ96PL5 475 aaPredicted RBP1.84□□□□□ -2.11
VPS8-228ENST00000628962 GPER1Q99527 375 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 C20orf27Q9GZN8 174 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 WDR61Q9GZS3 305 aaKnown RBP1.84□□□□□ -2.11
VPS8-228ENST00000628962 CCDC90BQ9GZT6 254 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 TMEM222Q9H0R3 208 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 SS18L2Q9UHA2 77 aa1.84□□□□□ -2.11
VPS8-228ENST00000628962 KLK5Q9Y337 293 aaPredicted RBP1.84□□□□□ -2.11
VPS8-228ENST00000628962 DIDO1Q9BTC0 2240 aaKnown RBP1.84□□□□□ -2.11
VPS8-228ENST00000628962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.84□□□□□ -2.12
VPS8-228ENST00000628962 CMYA5Q8N3K9 4069 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 TRIP11Q15643 1979 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 NCOA6Q14686 2063 aaPredicted RBP1.83□□□□□ -2.12
VPS8-228ENST00000628962 DNAH1Q9P2D7 4330 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 TRBV20OR9-2A0A075B6H5 130 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 A0A0J9YY10 115 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 A0A1B0GX78 115 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 LRCOL1A6NCL2 159 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 A8MWP6 167 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 AIPO00170 330 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 SLC17A3O00476 420 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 LECT2O14960 151 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 PLA2G10O15496 165 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 HMGN1P05114 100 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 SRP19P09132 144 aaKnown RBP1.83□□□□□ -2.12
VPS8-228ENST00000628962 RBP1P09455 135 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 CPMP14384 443 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 PPIBP23284 216 aaKnown RBP1.83□□□□□ -2.12
VPS8-228ENST00000628962 NPPCP23582 126 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 TSPEAR-AS2P59090 65 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 GNG5P63218 68 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 TMEM78Q5T7P6 136 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 MYO7BQ6PIF6 2116 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 AMTNQ6UX39 209 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 TMEM136Q6ZRR5 245 aa1.83□□□□□ -2.12
VPS8-228ENST00000628962 GKN2Q86XP6 184 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms