RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 KLK9Q2XQG4 91 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 OR4F17Q8NGA8 305 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 MRPL18Q9H0U6 180 aaKnown RBP15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 FBXL7Q9UJT9 491 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 KLK9Q9UKQ9 250 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 FLNCQ14315 2725 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 NUDT10Q8NFP7 164 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 NUDT11Q96G61 164 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 TXN2Q99757 166 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 NDUFAF3Q9BU61 184 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 SVEP1Q4LDE5 3571 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 CSMD1Q96PZ7 3565 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 MRPS12O15235 138 aaKnown RBP15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 SCGB2A1O75556 95 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 LTAP01374 205 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 FRMD6-AS1P0C7T7 363 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 TCL1AP56279 114 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 VN1R17PQ8TDU5 208 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 SGK494Q96LW2 274 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 CHRDL1Q9BU40 450 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 TMUB1Q9BVT8 246 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 PRO1933Q9H354 126 aa15.43■□□□□ 0.06
PCDHB11-202ENST00000624887 IGHV1-69DA0A0B4J2H0 117 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 SNURFLB1AK76 121 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 ATP6V0E1O15342 81 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 CA1P00915 261 aaPredicted RBP15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 IGHV1-69P01742 117 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 COX19Q49B96 90 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 UNQ5815/PRO19632Q6UWF5 114 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 EXOC3-AS1Q8N2X6 119 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 GRAMD2BQ96HH9 432 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 USP9XQ93008 2570 aaPredicted RBP15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 OR2T8A6NH00 312 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 IGHV3-23P01764 117 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 CTSGP08311 255 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 PRR27Q6MZM9 219 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 WDR73Q6P4I2 378 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 LYPD1Q8N2G4 141 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 CMTM2Q8TAZ6 248 aa15.42■□□□□ 0.06
PCDHB11-202ENST00000624887 IZUMO1RA6ND01 250 aa15.41■□□□□ 0.06
PCDHB11-202ENST00000624887 MT-ND6P03923 174 aa15.41■□□□□ 0.06
PCDHB11-202ENST00000624887 ECSCRQ19T08 205 aa15.41■□□□□ 0.06
PCDHB11-202ENST00000624887 BCL6BQ8N143 479 aaPredicted RBP15.41■□□□□ 0.06
PCDHB11-202ENST00000624887 C5orf56Q8N8D9 126 aa15.41■□□□□ 0.06
PCDHB11-202ENST00000624887 IGHV4-30-2A0A087WSY4 118 aa15.4■□□□□ 0.06
PCDHB11-202ENST00000624887 SPINK4O60575 86 aa15.4■□□□□ 0.06
PCDHB11-202ENST00000624887 SIGLEC15Q6ZMC9 328 aa15.4■□□□□ 0.06
PCDHB11-202ENST00000624887 C17orf77Q96MU5 243 aa15.4■□□□□ 0.06
PCDHB11-202ENST00000624887 SLC35B1P78383 322 aa15.4■□□□□ 0.06
PCDHB11-202ENST00000624887 ZNF414Q96IQ9 312 aa15.4■□□□□ 0.06
PCDHB11-202ENST00000624887 IGHV3OR16-10A0A075B7F0 116 aa15.39■□□□□ 0.05
PCDHB11-202ENST00000624887 COX6B1P14854 86 aa15.39■□□□□ 0.05
PCDHB11-202ENST00000624887 TMEM136Q6ZRR5 245 aa15.39■□□□□ 0.05
PCDHB11-202ENST00000624887 GBGT1Q8N5D6 347 aa15.39■□□□□ 0.05
PCDHB11-202ENST00000624887 TRAV40A0A0B4J280 105 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 TRBV6-1A0A0K0K1D8 114 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 A1L4Q6 167 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 IGLV2-11P01706 119 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 AMY1AP04745 511 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 C15orf32Q32M92 178 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 GOLT1AQ6ZVE7 132 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 Q86TA4 180 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 ZNF664Q8N3J9 261 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 ZNF502Q8TBZ5 544 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 TSKUQ8WUA8 353 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 TMEM18Q96B42 140 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 ZNF492Q9P255 531 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 VPS13CQ709C8 3753 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 LINC01548A6NM66 108 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 PDE6HQ13956 83 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 ZNF124Q15973 351 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 MRPL54Q6P161 138 aaKnown RBP15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 PIFOQ8TCI5 191 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 PRSS22Q9GZN4 317 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 MEGF9Q9H1U4 602 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 NAT8BQ9UHF3 227 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 MOB4Q9Y3A3 225 aa15.38■□□□□ 0.05
PCDHB11-202ENST00000624887 C19orf71A6NCJ1 209 aa15.37■□□□□ 0.05
PCDHB11-202ENST00000624887 RHOGP84095 191 aa15.37■□□□□ 0.05
PCDHB11-202ENST00000624887 BRD3OSQ6XYD6 125 aa15.37■□□□□ 0.05
PCDHB11-202ENST00000624887 LINC00322Q6ZN03 302 aaPredicted RBP15.37■□□□□ 0.05
PCDHB11-202ENST00000624887 TMEM256Q8N2U0 113 aa15.37■□□□□ 0.05
PCDHB11-202ENST00000624887 NEU1Q99519 415 aa15.37■□□□□ 0.05
PCDHB11-202ENST00000624887 UBR5O95071 2799 aaPredicted RBP15.37■□□□□ 0.05
PCDHB11-202ENST00000624887 TRAV8-1A0A0A6YYK1 113 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 GRIFINA4D1Z8 144 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 SH2D7A6NKC9 451 aaPredicted RBP15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 G3V318 75 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 CRISP2P16562 243 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 RASL11AQ6T310 242 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 NUP35Q8NFH5 326 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 A0A1B0GUS0 222 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 HLA-DQA1P01909 254 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 TMEM219Q86XT9 240 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 TMEM75Q8N9X5 138 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 WIPF2Q8TF74 440 aaPredicted RBP15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 RPP21Q9H633 154 aaKnown RBP15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 RABAC1Q9UI14 185 aa15.36■□□□□ 0.05
PCDHB11-202ENST00000624887 MSMBP08118 114 aa15.35■□□□□ 0.05
PCDHB11-202ENST00000624887 CT83Q5H943 113 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms