RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ELOA3CA0A087WX78 387 aaPredicted RBP9.05□□□□□ -0.96
LINC00963-217ENST00000624009 A0A087X0K7 114 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 A8MTW9 85 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 GOSR2O14653 212 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 C4BPBP20851 252 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 CAV2P51636 162 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 RRAS2P62070 204 aaPredicted RBP9.05□□□□□ -0.96
LINC00963-217ENST00000624009 SLC38A11Q08AI6 406 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 ARL16Q0P5N6 197 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 ATP6V1FQ16864 119 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 NRARPQ7Z6K4 114 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 STX12Q86Y82 276 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 Q8NAQ8 132 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 NEU1Q99519 415 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 NMES1Q9C002 83 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 SLC25A22Q9H936 323 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 RPRMQ9NS64 109 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 LSM5Q9Y4Y9 91 aaKnown RBP9.05□□□□□ -0.96
LINC00963-217ENST00000624009 ALMS1Q8TCU4 4167 aa9.05□□□□□ -0.96
LINC00963-217ENST00000624009 CXorf65A6NEN9 183 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 INMT-MINDY4F8WBC2 141 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 AGPAT2O15120 278 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 CXCL2P19875 107 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 BCAP31P51572 246 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 EBLN2Q6P2I7 272 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 CEMP1Q6PRD7 247 aaPredicted RBP9.04□□□□□ -0.96
LINC00963-217ENST00000624009 TMEM252Q8N6L7 170 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 C16orf92Q96LL3 132 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 C17orf77Q96MU5 243 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 RSG1Q9BU20 258 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 UQCC1Q9NVA1 299 aa9.04□□□□□ -0.96
LINC00963-217ENST00000624009 KLK5Q9Y337 293 aaPredicted RBP9.04□□□□□ -0.96
LINC00963-217ENST00000624009 A0A0J9YX75 114 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 SMIM9A6NGZ8 99 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 MPDU1O75352 247 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 RLN2P04090 185 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 OR5G3P0C626 314 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 EWSR1Q01844 656 aaKnown RBP eCLIP9.03□□□□□ -0.961e-6■■■■□ 24.6
LINC00963-217ENST00000624009 RAB32Q13637 225 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 ZNF705AQ6ZN79 300 aaPredicted RBP9.03□□□□□ -0.96
LINC00963-217ENST00000624009 C11orf45Q8TAV5 145 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 LINC00052Q96N35 136 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 SCRT1Q9BWW7 348 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 ARV1Q9H2C2 271 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 WDR83OSQ9Y284 106 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 X6R8D5 127 aa9.03□□□□□ -0.96
LINC00963-217ENST00000624009 E5RGE8 158 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 CST7O76096 145 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 RPL29P47914 159 aaKnown RBP9.02□□□□□ -0.97
LINC00963-217ENST00000624009 CAMLGP49069 296 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 TCTAP57738 103 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 S100A10P60903 97 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 BAXQ07812 192 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 PATE2Q6UY27 113 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 Q6ZRG5 221 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 PFDN5Q99471 154 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 MGST2Q99735 147 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 ARL6Q9H0F7 186 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 CLEC5AQ9NY25 188 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 DOK5Q9P104 306 aa9.02□□□□□ -0.97
LINC00963-217ENST00000624009 FAM24AA6NFZ4 105 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 ZNF705FA8MVS1 300 aaPredicted RBP9.01□□□□□ -0.97
LINC00963-217ENST00000624009 C11orf94C9JXX5 98 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 MRPS12O15235 138 aaKnown RBP9.01□□□□□ -0.97
LINC00963-217ENST00000624009 DUSP14O95147 198 aaKnown RBP9.01□□□□□ -0.97
LINC00963-217ENST00000624009 AMBPP02760 352 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 ZNF705DP0CH99 300 aaPredicted RBP9.01□□□□□ -0.97
LINC00963-217ENST00000624009 ZNF705BP0CI00 300 aaPredicted RBP9.01□□□□□ -0.97
LINC00963-217ENST00000624009 PRR20EP86478 221 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 PRR20CP86479 221 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 PRR20DP86480 221 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 PRR20BP86481 221 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 PRR20AP86496 221 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 PSG9Q00887 426 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 GDF5OSQ5U4N7 250 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 LCN15Q6UWW0 184 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 LINC00305Q7Z4B0 112 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 BPIFA4PQ86YQ2 179 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 ZNF709Q8N972 641 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 OR1L4Q8NGR5 311 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 PHLDA1Q8WV24 401 aaPredicted RBP9.01□□□□□ -0.97
LINC00963-217ENST00000624009 UHRF2Q96PU4 802 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 SLC25A31Q9H0C2 315 aa9.01□□□□□ -0.97
LINC00963-217ENST00000624009 TRAV8-2A0A0B4J237 113 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 IGHV4-28A0A0C4DH34 117 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 IGSF23A1L1A6 192 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 TMEM189A5PLL7 270 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 COX7A2P2O60397 106 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 PET100P0DJ07 73 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 CXCL3P19876 107 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 FAM78BQ5VT40 261 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 C10orf113Q5VZT2 155 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 TMEM37Q8WXS4 190 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 C20orf173Q96LM9 149 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 SLC50A1Q9BRV3 221 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 DNAJC4Q9NNZ3 241 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 XCL2Q9UBD3 114 aa9□□□□□ -0.97
LINC00963-217ENST00000624009 HYDINQ4G0P3 5121 aa8.99□□□□□ -0.97
LINC00963-217ENST00000624009 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms