RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 ZNF586Q9NXT0 402 aa11.96□□□□□ -0.49
ATRX-211ENST00000623321 BMPR1BO00238 502 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 PEX7O00628 323 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 NBR2O15453 112 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 CD33P20138 364 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 KLF17Q5JT82 389 aaPredicted RBP11.95□□□□□ -0.5
ATRX-211ENST00000623321 CYB5R2Q6BCY4 276 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 Q8N6K4 173 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 NPIPB3Q92617 1050 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 NEU1Q99519 415 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 FBXL15Q9H469 300 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 FBXL7Q9UJT9 491 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATRX-211ENST00000623321 SPINK4O60575 86 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 NDUFA3O95167 84 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 PYYP10082 97 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 C10orf55Q5SWW7 151 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 PVRIGQ6DKI7 326 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 FXYD5Q96DB9 178 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 MIEN1Q9BRT3 115 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 MEGF9Q9H1U4 602 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 SERTAD4Q9NUC0 356 aa11.95□□□□□ -0.5
ATRX-211ENST00000623321 PDZD2O15018 2839 aa11.94□□□□□ -0.5
ATRX-211ENST00000623321 M0QZK8 103 aa11.94□□□□□ -0.5
ATRX-211ENST00000623321 TCAPO15273 167 aa11.94□□□□□ -0.5
ATRX-211ENST00000623321 REG1AP05451 166 aa11.94□□□□□ -0.5
ATRX-211ENST00000623321 TMEM11P17152 192 aa11.94□□□□□ -0.5
ATRX-211ENST00000623321 MYCNOSP40205 109 aa11.94□□□□□ -0.5
ATRX-211ENST00000623321 PLGLAQ15195 96 aa11.94□□□□□ -0.5
ATRX-211ENST00000623321 MRPL54Q6P161 138 aaKnown RBP11.94□□□□□ -0.5
ATRX-211ENST00000623321 VAMP8Q9BV40 100 aa11.94□□□□□ -0.5
ATRX-211ENST00000623321 APCSP02743 223 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 CRYGCP07315 174 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 SRIP30626 198 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 SLC35B1P78383 322 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 FBLN7Q53RD9 439 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 FAM120AOSQ5T036 256 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 Q8N976 141 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 VN1R17PQ8TDU5 208 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 GRAMD2BQ96HH9 432 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 PRRC2AP48634 2157 aaKnown RBP11.93□□□□□ -0.5
ATRX-211ENST00000623321 UNC79Q9P2D8 2635 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 A0A1W2PS18 150 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 TNXAQ16473 311 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 TDRG1Q3Y452 100 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 ETFRF1Q6IPR1 90 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 NHLRC2Q8NBF2 726 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 STXBP6Q8NFX7 210 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 OR4B1Q8NGF8 309 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 SMIM12Q96EX1 92 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 LINC00479Q96M42 142 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 RCHY1Q96PM5 261 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 ZNF331Q9NQX6 463 aaPredicted RBP11.93□□□□□ -0.5
ATRX-211ENST00000623321 C1RLQ9NZP8 487 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 MRPL36Q9P0J6 103 aaKnown RBP11.93□□□□□ -0.5
ATRX-211ENST00000623321 RNF114Q9Y508 228 aa11.93□□□□□ -0.5
ATRX-211ENST00000623321 TNCP24821 2201 aa11.92□□□□□ -0.5
ATRX-211ENST00000623321 ZNF253O75346 499 aa11.92□□□□□ -0.5
ATRX-211ENST00000623321 ZNF324O75467 553 aaPredicted RBP11.92□□□□□ -0.5
ATRX-211ENST00000623321 RPL27AP46776 148 aaKnown RBP11.92□□□□□ -0.5
ATRX-211ENST00000623321 AMTP48728 403 aa11.92□□□□□ -0.5
ATRX-211ENST00000623321 C5orf64Q2M2E5 130 aa11.92□□□□□ -0.5
ATRX-211ENST00000623321 KIAA1644Q3SXP7 199 aa11.92□□□□□ -0.5
ATRX-211ENST00000623321 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
ATRX-211ENST00000623321 NRN1Q9NPD7 142 aa11.92□□□□□ -0.5
ATRX-211ENST00000623321 MRPL27Q9P0M9 148 aaKnown RBP11.92□□□□□ -0.5
ATRX-211ENST00000623321 IGLC7A0M8Q6 106 aa11.91□□□□□ -0.5
ATRX-211ENST00000623321 NCBP2LA6PVI3 153 aaKnown RBP11.91□□□□□ -0.5
ATRX-211ENST00000623321 CA1P00915 261 aaPredicted RBP11.91□□□□□ -0.5
ATRX-211ENST00000623321 ZNF705AQ6ZN79 300 aaPredicted RBP11.91□□□□□ -0.5
ATRX-211ENST00000623321 LINC00305Q7Z4B0 112 aa11.91□□□□□ -0.5
ATRX-211ENST00000623321 TRGV9Q99603 122 aa11.91□□□□□ -0.5
ATRX-211ENST00000623321 DIRC3C9JPN6 131 aa11.91□□□□□ -0.5
ATRX-211ENST00000623321 KRTDAPP60985 99 aa11.91□□□□□ -0.5
ATRX-211ENST00000623321 NUDT10Q8NFP7 164 aa11.91□□□□□ -0.5
ATRX-211ENST00000623321 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
ATRX-211ENST00000623321 FAM103A1Q9BTL3 118 aaKnown RBP11.91□□□□□ -0.5
ATRX-211ENST00000623321 PAM16Q9Y3D7 125 aa11.91□□□□□ -0.5
ATRX-211ENST00000623321 SLAQ13239 276 aa11.9□□□□□ -0.5
ATRX-211ENST00000623321 PIFOQ8TCI5 191 aa11.9□□□□□ -0.5
ATRX-211ENST00000623321 TNFRSF19Q9NS68 423 aa11.9□□□□□ -0.5
ATRX-211ENST00000623321 KLF12Q9Y4X4 402 aa11.9□□□□□ -0.5
ATRX-211ENST00000623321 SOX21Q9Y651 276 aaPredicted RBP11.9□□□□□ -0.5
ATRX-211ENST00000623321 SVEP1Q4LDE5 3571 aa11.9□□□□□ -0.51
ATRX-211ENST00000623321 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 SMAD7O15105 426 aaKnown RBP11.89□□□□□ -0.51
ATRX-211ENST00000623321 CNIH1O95406 144 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 HIST1H1EP10412 219 aaKnown RBP11.89□□□□□ -0.51
ATRX-211ENST00000623321 PMCHP20382 165 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 ATP5L2Q7Z4Y8 100 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 NIT1Q86X76 327 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 Q8N9W7 124 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 NUP35Q8NFH5 326 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 C18orf32Q8TCD1 76 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 TSKUQ8WUA8 353 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 SRSF12Q8WXF0 261 aaKnown RBP11.89□□□□□ -0.51
ATRX-211ENST00000623321 C22orf15Q8WYQ4 148 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
ATRX-211ENST00000623321 ATG101Q9BSB4 218 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms