RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 COL4A3Q01955 1670 aa13.09□□□□□ -0.31
GABRB3-215ENST00000622697 TMEM14BQ9NUH8 114 aa13.09□□□□□ -0.31
GABRB3-215ENST00000622697 C5orf64Q2M2E5 130 aa13.09□□□□□ -0.31
GABRB3-215ENST00000622697 C17orf58Q2M2W7 97 aa13.09□□□□□ -0.31
GABRB3-215ENST00000622697 SMKR1H3BMG3 65 aa13.08□□□□□ -0.31
GABRB3-215ENST00000622697 IGKV3D-20A0A0C4DH25 116 aa13.08□□□□□ -0.32
GABRB3-215ENST00000622697 RNASE1P07998 156 aaKnown RBP13.08□□□□□ -0.32
GABRB3-215ENST00000622697 SIGLEC15Q6ZMC9 328 aa13.08□□□□□ -0.32
GABRB3-215ENST00000622697 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-215ENST00000622697 FGF23Q9GZV9 251 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-215ENST00000622697 PPP1R17O96001 155 aa13.08□□□□□ -0.32
GABRB3-215ENST00000622697 A0A1B0GWB2 263 aa13.07□□□□□ -0.32
GABRB3-215ENST00000622697 SH2D1AO60880 128 aa13.07□□□□□ -0.32
GABRB3-215ENST00000622697 C11orf44Q8N8P7 122 aa13.07□□□□□ -0.32
GABRB3-215ENST00000622697 LY96Q9Y6Y9 160 aa13.07□□□□□ -0.32
GABRB3-215ENST00000622697 VDAC2P45880 294 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-215ENST00000622697 LINC01587Q99440 93 aa13.07□□□□□ -0.32
GABRB3-215ENST00000622697 ABCA4P78363 2273 aa13.07□□□□□ -0.32
GABRB3-215ENST00000622697 TRAV41A0A0B4J266 112 aa13.07□□□□□ -0.32
GABRB3-215ENST00000622697 MRAP2Q96G30 205 aa13.07□□□□□ -0.32
GABRB3-215ENST00000622697 NUTF2P61970 127 aaKnown RBP13.07□□□□□ -0.32
GABRB3-215ENST00000622697 SRSF1Q07955 248 aaKnown RBP eCLIP13.06□□□□□ -0.32
GABRB3-215ENST00000622697 TRAV21A0A0B4J279 112 aa13.06□□□□□ -0.32
GABRB3-215ENST00000622697 DIAPH2-AS1Q14236 149 aa13.06□□□□□ -0.32
GABRB3-215ENST00000622697 CIRBPQ14011 172 aaKnown RBP13.06□□□□□ -0.32
GABRB3-215ENST00000622697 C19orf67A6NJJ6 358 aa13.06□□□□□ -0.32
GABRB3-215ENST00000622697 C15orf65H3BRN8 121 aa13.06□□□□□ -0.32
GABRB3-215ENST00000622697 EREGO14944 169 aa13.06□□□□□ -0.32
GABRB3-215ENST00000622697 DPM2O94777 84 aa13.06□□□□□ -0.32
GABRB3-215ENST00000622697 NXT2Q9NPJ8 142 aaKnown RBP13.06□□□□□ -0.32
GABRB3-215ENST00000622697 GTSCR1Q86UQ5 136 aa13.06□□□□□ -0.32
GABRB3-215ENST00000622697 A0A087X0K7 114 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 PSG3Q16557 428 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 ST20Q9HBF5 79 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 TPSG1Q9NRR2 321 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 PAX1P15863 534 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 SMAGPQ0VAQ4 97 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 AMN1Q8IY45 258 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 EMP1P54849 157 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 PAPPA-AS1Q5QFB9 102 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 NPFFR1Q9GZQ6 430 aa13.05□□□□□ -0.32
GABRB3-215ENST00000622697 POLR3KQ9Y2Y1 108 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-215ENST00000622697 ERCC8Q13216 396 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 FAM169BQ8N8A8 192 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 TMEM262E9PQX1 116 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 IGKCP01834 107 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 ZNF124Q15973 351 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 NDUFA4L2Q9NRX3 87 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
GABRB3-215ENST00000622697 IGHV3-64A0A075B6Q5 118 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 GGTLC3B5MD39 225 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 H7C1H1 209 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 PPBPP02775 128 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 PSMG4Q5JS54 123 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 PLA2G2EQ9NZK7 142 aa13.04□□□□□ -0.32
GABRB3-215ENST00000622697 MPV17L2Q567V2 206 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 LDLRAD2Q5SZI1 272 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 NOTCH3Q9UM47 2321 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 TOMM40O96008 361 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 IGHV2-5P01817 119 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 GUSBP1Q15486 140 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 ORAOV1Q8WV07 137 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 SLC25A2Q9BXI2 301 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 MEGF9Q9H1U4 602 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 ARMS2P0C7Q2 107 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 Q86TA4 180 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 C5orf30Q96GV9 206 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 RASL11AQ6T310 242 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 SLX1AQ9BQ83 275 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 GTF3C1Q12789 2109 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 F2Z2F3 143 aa13.03□□□□□ -0.32
GABRB3-215ENST00000622697 EFNA4P52798 201 aa13.02□□□□□ -0.32
GABRB3-215ENST00000622697 CD300EQ496F6 205 aaPredicted RBP13.02□□□□□ -0.32
GABRB3-215ENST00000622697 LYPD6Q86Y78 171 aa13.02□□□□□ -0.32
GABRB3-215ENST00000622697 SYS1-DBNDD2H3BUS1 97 aa13.02□□□□□ -0.32
GABRB3-215ENST00000622697 CHTOPQ9Y3Y2 248 aaKnown RBP13.02□□□□□ -0.32
GABRB3-215ENST00000622697 SRRM4A7MD48 611 aaKnown RBP13.02□□□□□ -0.33
GABRB3-215ENST00000622697 IFI27P40305 119 aaPredicted RBP13.02□□□□□ -0.33
GABRB3-215ENST00000622697 DKK1O94907 266 aa13.02□□□□□ -0.33
GABRB3-215ENST00000622697 MOB4Q9Y3A3 225 aa13.02□□□□□ -0.33
GABRB3-215ENST00000622697 WT1-ASQ06250 92 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 A8MWP6 167 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 H3BUX3 64 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 FNDC10F2Z333 226 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 GNLYP22749 145 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 BEND2Q8NDZ0 799 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 SSC4DQ8WTU2 575 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 RNF5Q99942 180 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 SPRNQ5BIV9 151 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 OR13C6PQ8NH95 151 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 TOMM7Q9P0U1 55 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 ITGB1BP1O14713 200 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 TMEM155Q4W5P6 130 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 OR4X2Q8NGF9 303 aa13.01□□□□□ -0.33
GABRB3-215ENST00000622697 BPESC1Q9GZL8 116 aa13□□□□□ -0.33
GABRB3-215ENST00000622697 ZFHX2Q9C0A1 2572 aaPredicted RBP13□□□□□ -0.33
GABRB3-215ENST00000622697 IGHV3-73A0A0B4J1V6 119 aa13□□□□□ -0.33
GABRB3-215ENST00000622697 RNF182Q8N6D2 247 aa13□□□□□ -0.33
GABRB3-215ENST00000622697 C8orf49Q96NF6 230 aa13□□□□□ -0.33
GABRB3-215ENST00000622697 PF4P02776 101 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 257.8 ms