RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 INSP01308 110 aa8.5□□□□□ -1.05
UPF3B-204ENST00000619445 IL5P05113 134 aa8.5□□□□□ -1.05
UPF3B-204ENST00000619445 FAM3BP58499 235 aaPredicted RBP8.5□□□□□ -1.05
UPF3B-204ENST00000619445 FXYD7P58549 80 aa8.5□□□□□ -1.05
UPF3B-204ENST00000619445 DAD1P61803 113 aa8.5□□□□□ -1.05
UPF3B-204ENST00000619445 ID3Q02535 119 aa8.5□□□□□ -1.05
UPF3B-204ENST00000619445 CNPY1Q3B7I2 92 aa8.5□□□□□ -1.05
UPF3B-204ENST00000619445 ACOT7LQ6ZUV0 252 aa8.5□□□□□ -1.05
UPF3B-204ENST00000619445 CCDC190Q86UF4 302 aa8.5□□□□□ -1.05
UPF3B-204ENST00000619445 CCDC160A6NGH7 325 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 CENPXA8MT69 81 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 ZNF701M0R085 212 aaPredicted RBP8.49□□□□□ -1.05
UPF3B-204ENST00000619445 HYPMO75409 117 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 TSPOP30536 169 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 PXDC1Q5TGL8 231 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 CYP2G1PQ6ZSU1 146 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 C1orf158Q8N1D5 194 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 TMEM256Q8N2U0 113 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 C15orf53Q8NAA6 179 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 HIGD1AQ9Y241 93 aa8.49□□□□□ -1.05
UPF3B-204ENST00000619445 YTHDF2Q9Y5A9 579 aaKnown RBP8.49□□□□□ -1.05
UPF3B-204ENST00000619445 C9orf170A2RU37 121 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 SMCO3A2RU48 225 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 F6UB75 175 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 H3BRN7 92 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 DEFB1P60022 68 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 PLP1P60201 277 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 DLK1P80370 383 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 TRIQKQ629K1 86 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 AMTNQ6UX39 209 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 GSG1LQ6UXU4 331 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 SMIM8Q96KF7 97 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 SHANK2-AS3Q9BTD1 123 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 SLC25A39Q9BZJ4 359 aaPredicted RBP8.48□□□□□ -1.05
UPF3B-204ENST00000619445 PSENENQ9NZ42 101 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 PRSS29PA6NIE9 313 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 H3BP45 60 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 K7EPK0 472 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 NDUFB6O95139 128 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 CXCL2P19875 107 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 CNN1P51911 297 aaKnown RBP8.48□□□□□ -1.05
UPF3B-204ENST00000619445 TAS2R30P59541 319 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 ZNF738Q8NE65 137 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 OR10P1Q8NGE3 313 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 LRRC20Q8TCA0 184 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 C20orf173Q96LM9 149 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 NPVFQ9HCQ7 196 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 PPP1R14DQ9NXH3 145 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 MGAT4CQ9UBM8 478 aa8.48□□□□□ -1.05
UPF3B-204ENST00000619445 A0A087X0K7 114 aa8.47□□□□□ -1.05
UPF3B-204ENST00000619445 TSC22D2O75157 780 aa8.47□□□□□ -1.05
UPF3B-204ENST00000619445 OR5G3P0C626 314 aa8.47□□□□□ -1.05
UPF3B-204ENST00000619445 LINC00869P0C866 280 aa8.47□□□□□ -1.05
UPF3B-204ENST00000619445 HTN3P15516 51 aa8.47□□□□□ -1.05
UPF3B-204ENST00000619445 GATA2P23769 480 aaPredicted RBP8.47□□□□□ -1.05
UPF3B-204ENST00000619445 POLR2GP62487 172 aaKnown RBP eCLIP8.47□□□□□ -1.05
UPF3B-204ENST00000619445 FGL1Q08830 312 aa8.47□□□□□ -1.05
UPF3B-204ENST00000619445 TEPPQ6URK8 271 aa8.47□□□□□ -1.05
UPF3B-204ENST00000619445 OR11H7Q8NGC8 314 aa8.47□□□□□ -1.05
UPF3B-204ENST00000619445 GGACTQ9BVM4 153 aa8.47□□□□□ -1.05
UPF3B-204ENST00000619445 BOLA2-SMG1P6H3BVE0 249 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 SSSCA1O60232 199 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 OR4E1P0C645 316 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 MED14OSP0DP75 135 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 C4orf46Q504U0 113 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 TMEM14EPQ6UXP3 125 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 ZNF546Q86UE3 836 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 SCRT1Q9BWW7 348 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 SRRQ9GZT4 340 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 HERC2O95714 4834 aa8.46□□□□□ -1.06
UPF3B-204ENST00000619445 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 GOSR2O14653 212 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 ADAP1O75689 374 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 TAS2R60P59551 318 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 RHOBP62745 196 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 RAB31Q13636 194 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 PSG3Q16557 428 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 SPINK13Q1W4C9 94 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 IAH1Q2TAA2 248 aaPredicted RBP8.45□□□□□ -1.06
UPF3B-204ENST00000619445 TMEM88Q6PEY1 159 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 LCN15Q6UWW0 184 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 TMEM182Q6ZP80 229 aaPredicted RBP8.45□□□□□ -1.06
UPF3B-204ENST00000619445 ZNF493Q6ZR52 646 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 Q6ZR54 194 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 OR8A1Q8NGG7 326 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 C17orf77Q96MU5 243 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 C20orf144Q9BQM9 153 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 SLC50A1Q9BRV3 221 aa8.45□□□□□ -1.06
UPF3B-204ENST00000619445 TRAV8-2A0A0B4J237 113 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 PMS2P5A8MQ11 134 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 M0R2N4 97 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 M0R2Z0 102 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 RTL8CO15255 209 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 CRXO43186 299 aaPredicted RBP8.44□□□□□ -1.06
UPF3B-204ENST00000619445 CXCL3P19876 107 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 ANXA7P20073 488 aaKnown RBP8.44□□□□□ -1.06
UPF3B-204ENST00000619445 BPIFA4PQ86YQ2 179 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 C16orf74Q96GX8 76 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 ATG101Q9BSB4 218 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms