RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 TNFAIP6P98066 277 aaPredicted RBP12.66□□□□□ -0.38
SYNRG-223ENST00000616179 TTC9CQ8N5M4 171 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 TMEM14BQ9NUH8 114 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 SMRP1Q8NCR6 262 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 CACNG8Q8WXS5 425 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 FOXE3Q13461 319 aa12.65□□□□□ -0.38
SYNRG-223ENST00000616179 CHAC1Q9BUX1 264 aa12.65□□□□□ -0.38
SYNRG-223ENST00000616179 SRRM4A7MD48 611 aaKnown RBP12.65□□□□□ -0.38
SYNRG-223ENST00000616179 LGALS7P47929 136 aa12.65□□□□□ -0.38
SYNRG-223ENST00000616179 RPRMLQ8N4K4 120 aa12.65□□□□□ -0.38
SYNRG-223ENST00000616179 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.38
SYNRG-223ENST00000616179 TRIOBPQ9H2D6 2365 aa12.65□□□□□ -0.38
SYNRG-223ENST00000616179 CECR9P0C854 216 aa12.65□□□□□ -0.38
SYNRG-223ENST00000616179 FXYD2P54710 66 aa12.65□□□□□ -0.38
SYNRG-223ENST00000616179 ZNF714Q96N38 554 aa12.65□□□□□ -0.38
SYNRG-223ENST00000616179 MUC22E2RYF6 1773 aaPredicted RBP12.64□□□□□ -0.39
SYNRG-223ENST00000616179 IGKV1D-17A0A075B6S4 117 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 SPAARA0A1B0GVQ0 90 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 VWC2LB2RUY7 222 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 CRYBA4P53673 196 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 C2orf83Q53S99 150 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 ZC2HC1BQ5TFG8 222 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 LINC01545Q5VT33 79 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 RPEQ96AT9 228 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 VGLL1Q99990 258 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 MAP1LC3AQ9H492 121 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 IGHV3-35A0A0C4DH35 117 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.64□□□□□ -0.39
SYNRG-223ENST00000616179 J3KRW8 73 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
SYNRG-223ENST00000616179 ZNF502Q8TBZ5 544 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 CCL17Q92583 94 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 NBEAQ8NFP9 2946 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 IGHV3OR16-8A0A075B7F1 116 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 NCBP2LA6PVI3 153 aaKnown RBP12.64□□□□□ -0.39
SYNRG-223ENST00000616179 LOXL1Q08397 574 aaPredicted RBP12.64□□□□□ -0.39
SYNRG-223ENST00000616179 HES1Q14469 280 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 URB1-AS1Q96HZ7 61 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 NDFIP1Q9BT67 221 aa12.64□□□□□ -0.39
SYNRG-223ENST00000616179 C15orf65H3BRN8 121 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 CCL3L1P16619 93 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 ANXA2RQ3ZCQ2 193 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 NEU4Q8WWR8 484 aaPredicted RBP12.63□□□□□ -0.39
SYNRG-223ENST00000616179 M0R3E3 92 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 LTBRP36941 435 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 ANAPC13Q9BS18 74 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 NKX2-8O15522 239 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 SAP25Q8TEE9 199 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 FXYD5Q96DB9 178 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 MBD6Q96DN6 1003 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 SIT1Q9Y3P8 196 aa12.63□□□□□ -0.39
SYNRG-223ENST00000616179 CGB1A6NKQ9 187 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 C2orf91Q6ZV80 131 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 C1orf159Q96HA4 380 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 RNF7Q9UBF6 113 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 SLC25A48Q6ZT89 311 aaKnown RBP12.62□□□□□ -0.39
SYNRG-223ENST00000616179 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 SIGLEC8Q9NYZ4 499 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 PTPRZ1P23471 2315 aaPredicted RBP12.62□□□□□ -0.39
SYNRG-223ENST00000616179 CHD9Q3L8U1 2897 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 IL4P05112 153 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 RPL27AP46776 148 aaKnown RBP12.62□□□□□ -0.39
SYNRG-223ENST00000616179 Q1RN00 199 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 GCSAMQ8N6F7 178 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 RPUSD1Q9UJJ7 312 aaKnown RBP12.62□□□□□ -0.39
SYNRG-223ENST00000616179 RPL7P18124 248 aaKnown RBP12.62□□□□□ -0.39
SYNRG-223ENST00000616179 CD40P25942 277 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 LOXL3P58215 753 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 SYT8Q8NBV8 401 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 ZNF576Q9H609 170 aa12.62□□□□□ -0.39
SYNRG-223ENST00000616179 COX7A1P24310 79 aa12.61□□□□□ -0.39
SYNRG-223ENST00000616179 TMEM178AQ8NBL3 297 aa12.61□□□□□ -0.39
SYNRG-223ENST00000616179 PROCRQ9UNN8 238 aa12.61□□□□□ -0.39
SYNRG-223ENST00000616179 PSG8Q9UQ74 426 aa12.61□□□□□ -0.39
SYNRG-223ENST00000616179 LTAP01374 205 aa12.61□□□□□ -0.39
SYNRG-223ENST00000616179 ATP1A1-AS1Q5TC04 95 aa12.61□□□□□ -0.39
SYNRG-223ENST00000616179 SS18L2Q9UHA2 77 aa12.61□□□□□ -0.39
SYNRG-223ENST00000616179 CYSLTR1Q9Y271 337 aa12.61□□□□□ -0.39
SYNRG-223ENST00000616179 C22orf46C9J442 243 aa12.61□□□□□ -0.39
SYNRG-223ENST00000616179 PRSS46E5RG02 174 aa12.6□□□□□ -0.39
SYNRG-223ENST00000616179 FAM120AOSQ5T036 256 aa12.6□□□□□ -0.39
SYNRG-223ENST00000616179 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
SYNRG-223ENST00000616179 PATE2Q6UY27 113 aa12.6□□□□□ -0.39
SYNRG-223ENST00000616179 OR4C13Q8NGP0 309 aa12.6□□□□□ -0.39
SYNRG-223ENST00000616179 ZCCHC24Q8N2G6 241 aaKnown RBP12.6□□□□□ -0.39
SYNRG-223ENST00000616179 DEFB104AQ8WTQ1 72 aa12.6□□□□□ -0.39
SYNRG-223ENST00000616179 SCNM1Q9BWG6 230 aa12.6□□□□□ -0.39
SYNRG-223ENST00000616179 IGKCP01834 107 aa12.59□□□□□ -0.39
SYNRG-223ENST00000616179 NPIPB6E9PJ23 425 aa12.59□□□□□ -0.39
SYNRG-223ENST00000616179 MC5RP33032 325 aa12.59□□□□□ -0.39
SYNRG-223ENST00000616179 NPIPB5A8MRT5 1133 aa12.59□□□□□ -0.39
SYNRG-223ENST00000616179 Q86TA4 180 aa12.59□□□□□ -0.39
SYNRG-223ENST00000616179 C11orf53Q8IXP5 236 aa12.58□□□□□ -0.39
SYNRG-223ENST00000616179 C1orf229Q6ZS94 237 aaPredicted RBP12.58□□□□□ -0.4
SYNRG-223ENST00000616179 TRAV40A0A0B4J280 105 aa12.58□□□□□ -0.4
SYNRG-223ENST00000616179 OR11H12B2RN74 326 aa12.58□□□□□ -0.4
SYNRG-223ENST00000616179 OR11H1Q8NG94 326 aa12.58□□□□□ -0.4
SYNRG-223ENST00000616179 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
SYNRG-223ENST00000616179 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms