RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 RPL7P18124 248 aaKnown RBP13.15□□□□□ -0.3
VCX3A-203ENST00000612369 VAMP2P63027 116 aa13.15□□□□□ -0.3
VCX3A-203ENST00000612369 PXDC1Q5TGL8 231 aa13.15□□□□□ -0.3
VCX3A-203ENST00000612369 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.15□□□□□ -0.3
VCX3A-203ENST00000612369 ZNF705AQ6ZN79 300 aaPredicted RBP13.15□□□□□ -0.3
VCX3A-203ENST00000612369 C12orf45Q8N5I9 185 aaPredicted RBP13.15□□□□□ -0.3
VCX3A-203ENST00000612369 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.3
VCX3A-203ENST00000612369 FAM240BA0A1B0GVZ2 78 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 CCSO14618 274 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 DEDDO75618 318 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 IGKV3-20P01619 116 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 HLA-DMBP28068 263 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 DEFB1P60022 68 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 PSG9Q00887 426 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 MZT2BQ6NZ67 158 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 C17orf77Q96MU5 243 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 SCRT1Q9BWW7 348 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 DOK5Q9P104 306 aa13.14□□□□□ -0.31
VCX3A-203ENST00000612369 C5orf51A6NDU8 294 aa13.13□□□□□ -0.31
VCX3A-203ENST00000612369 ZNF705FA8MVS1 300 aaPredicted RBP13.13□□□□□ -0.31
VCX3A-203ENST00000612369 FAM25EA8MYX2 175 aa13.13□□□□□ -0.31
VCX3A-203ENST00000612369 OR5G3P0C626 314 aa13.13□□□□□ -0.31
VCX3A-203ENST00000612369 ZNF705DP0CH99 300 aaPredicted RBP13.13□□□□□ -0.31
VCX3A-203ENST00000612369 ZNF705BP0CI00 300 aaPredicted RBP13.13□□□□□ -0.31
VCX3A-203ENST00000612369 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
VCX3A-203ENST00000612369 ZNF546Q86UE3 836 aa13.13□□□□□ -0.31
VCX3A-203ENST00000612369 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
VCX3A-203ENST00000612369 C2orf50Q96LR7 162 aa13.13□□□□□ -0.31
VCX3A-203ENST00000612369 SEC22CQ9BRL7 303 aa13.13□□□□□ -0.31
VCX3A-203ENST00000612369 TRAV10A0A0B4J240 114 aa13.12□□□□□ -0.31
VCX3A-203ENST00000612369 TMEM189A5PLL7 270 aa13.12□□□□□ -0.31
VCX3A-203ENST00000612369 A8MTW9 85 aa13.12□□□□□ -0.31
VCX3A-203ENST00000612369 F6UB75 175 aa13.12□□□□□ -0.31
VCX3A-203ENST00000612369 GOSR2O14653 212 aa13.12□□□□□ -0.31
VCX3A-203ENST00000612369 C20orf173Q96LM9 149 aa13.12□□□□□ -0.31
VCX3A-203ENST00000612369 ARL6Q9H0F7 186 aa13.12□□□□□ -0.31
VCX3A-203ENST00000612369 LSM5Q9Y4Y9 91 aaKnown RBP13.12□□□□□ -0.31
VCX3A-203ENST00000612369 DUSP14O95147 198 aaKnown RBP13.11□□□□□ -0.31
VCX3A-203ENST00000612369 PVALBP20472 110 aaPredicted RBP13.11□□□□□ -0.31
VCX3A-203ENST00000612369 FXYD7P58549 80 aa13.11□□□□□ -0.31
VCX3A-203ENST00000612369 SLC38A11Q08AI6 406 aa13.11□□□□□ -0.31
VCX3A-203ENST00000612369 ARL16Q0P5N6 197 aa13.11□□□□□ -0.31
VCX3A-203ENST00000612369 ASAH1Q13510 395 aa13.11□□□□□ -0.31
VCX3A-203ENST00000612369 Q6ZTC4 211 aa13.11□□□□□ -0.31
VCX3A-203ENST00000612369 SLC35B3Q9H1N7 401 aa13.11□□□□□ -0.31
VCX3A-203ENST00000612369 ARV1Q9H2C2 271 aa13.11□□□□□ -0.31
VCX3A-203ENST00000612369 A0A087X0K7 114 aa13.1□□□□□ -0.31
VCX3A-203ENST00000612369 IGLL5B9A064 214 aa13.1□□□□□ -0.31
VCX3A-203ENST00000612369 AGPAT2O15120 278 aa13.1□□□□□ -0.31
VCX3A-203ENST00000612369 BCAP31P51572 246 aa13.1□□□□□ -0.31
VCX3A-203ENST00000612369 GSG1LQ6UXU4 331 aa13.1□□□□□ -0.31
VCX3A-203ENST00000612369 PATE2Q6UY27 113 aa13.1□□□□□ -0.31
VCX3A-203ENST00000612369 UHRF2Q96PU4 802 aa13.1□□□□□ -0.31
VCX3A-203ENST00000612369 GOLT1BQ9Y3E0 138 aa13.1□□□□□ -0.31
VCX3A-203ENST00000612369 RFNGQ9Y644 331 aa13.1□□□□□ -0.31
VCX3A-203ENST00000612369 TRAV8-2A0A0B4J237 113 aa13.09□□□□□ -0.31
VCX3A-203ENST00000612369 AMBPP02760 352 aa13.09□□□□□ -0.31
VCX3A-203ENST00000612369 CAV2P51636 162 aa13.09□□□□□ -0.31
VCX3A-203ENST00000612369 FGL1Q08830 312 aa13.09□□□□□ -0.31
VCX3A-203ENST00000612369 RAB31Q13636 194 aa13.09□□□□□ -0.31
VCX3A-203ENST00000612369 C11orf1Q9H5F2 150 aa13.09□□□□□ -0.31
VCX3A-203ENST00000612369 CELA1Q9UNI1 258 aa13.09□□□□□ -0.31
VCX3A-203ENST00000612369 IGHV3OR16-12A0A075B7B8 117 aa13.08□□□□□ -0.32
VCX3A-203ENST00000612369 TEX48A0A1B0GUV7 120 aa13.08□□□□□ -0.32
VCX3A-203ENST00000612369 A6NHS1 94 aa13.08□□□□□ -0.32
VCX3A-203ENST00000612369 SPART-AS1P0CW21 52 aa13.08□□□□□ -0.32
VCX3A-203ENST00000612369 IL15RAQ13261 267 aa13.08□□□□□ -0.32
VCX3A-203ENST00000612369 C12orf74Q32Q52 190 aa13.08□□□□□ -0.32
VCX3A-203ENST00000612369 AMTNQ6UX39 209 aa13.08□□□□□ -0.32
VCX3A-203ENST00000612369 APLNQ9ULZ1 77 aa13.08□□□□□ -0.32
VCX3A-203ENST00000612369 CXCL2P19875 107 aa13.07□□□□□ -0.32
VCX3A-203ENST00000612369 CNN1P51911 297 aaKnown RBP13.07□□□□□ -0.32
VCX3A-203ENST00000612369 LINC00305Q7Z4B0 112 aa13.07□□□□□ -0.32
VCX3A-203ENST00000612369 C1orf158Q8N1D5 194 aa13.07□□□□□ -0.32
VCX3A-203ENST00000612369 ENKURQ8TC29 256 aa13.07□□□□□ -0.32
VCX3A-203ENST00000612369 LRRC20Q8TCA0 184 aa13.07□□□□□ -0.32
VCX3A-203ENST00000612369 IGF2BP2-AS1Q96M15 143 aa13.07□□□□□ -0.32
VCX3A-203ENST00000612369 MGST2Q99735 147 aa13.07□□□□□ -0.32
VCX3A-203ENST00000612369 RNF126Q9BV68 326 aa13.07□□□□□ -0.32
VCX3A-203ENST00000612369 GPN1Q9HCN4 374 aaPredicted RBP13.07□□□□□ -0.32
VCX3A-203ENST00000612369 LYRM2Q9NU23 88 aaPredicted RBP13.07□□□□□ -0.32
VCX3A-203ENST00000612369 EPPK1P58107 5090 aaKnown RBP13.07□□□□□ -0.32
VCX3A-203ENST00000612369 FAM24AA6NFZ4 105 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 MRPS12O15235 138 aaKnown RBP13.06□□□□□ -0.32
VCX3A-203ENST00000612369 COX7A2P2O60397 106 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 UPK1BO75841 260 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 CST7O76096 145 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 HBE1P02100 147 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 CXCL3P19876 107 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 S100A11P31949 105 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 CAMLGP49069 296 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 SULT1A1P50225 295 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 IGFL4Q6B9Z1 124 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 Q6ZRG5 221 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 RNF182Q8N6D2 247 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 ZNF738Q8NE65 137 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 OR11H7Q8NGC8 314 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 UQCC1Q9NVA1 299 aa13.06□□□□□ -0.32
VCX3A-203ENST00000612369 PTTG2Q9NZH5 202 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 875.9 ms