RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CIARTQ8N365 385 aaPredicted RBP13.63□□□□□ -0.23
NEK3-206ENST00000611833 OR4F17Q8NGA8 305 aa13.63□□□□□ -0.23
NEK3-206ENST00000611833 SOX21Q9Y651 276 aaPredicted RBP13.63□□□□□ -0.23
NEK3-206ENST00000611833 HRNRQ86YZ3 2850 aaPredicted RBP13.63□□□□□ -0.23
NEK3-206ENST00000611833 IGF2RP11717 2491 aa13.63□□□□□ -0.23
NEK3-206ENST00000611833 A0A1W2PRD5 423 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 A0A1W2PRF3 423 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 A0A1W2PRM7 423 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 KLRD1Q13241 179 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 SHANK2-AS3Q9BTD1 123 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 GFRA4Q9GZZ7 299 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 LOC105371242A0A075B767 164 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 UCNP55089 124 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 RBPMS2Q6ZRY4 209 aaKnown RBP13.62□□□□□ -0.23
NEK3-206ENST00000611833 MRPL52Q86TS9 123 aaKnown RBP13.62□□□□□ -0.23
NEK3-206ENST00000611833 CFHR4Q92496 578 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 RNF24Q9Y225 148 aa13.62□□□□□ -0.23
NEK3-206ENST00000611833 KLF17Q5JT82 389 aaPredicted RBP13.61□□□□□ -0.23
NEK3-206ENST00000611833 TRBV19A0A075B6N1 114 aa13.61□□□□□ -0.23
NEK3-206ENST00000611833 IL4P05112 153 aa13.61□□□□□ -0.23
NEK3-206ENST00000611833 C11orf71Q6IPW1 123 aa13.61□□□□□ -0.23
NEK3-206ENST00000611833 NPBQ8NG41 125 aa13.61□□□□□ -0.23
NEK3-206ENST00000611833 RNF125Q96EQ8 232 aa13.61□□□□□ -0.23
NEK3-206ENST00000611833 C17orf77Q96MU5 243 aa13.61□□□□□ -0.23
NEK3-206ENST00000611833 S4R3C0 116 aa13.61□□□□□ -0.23
NEK3-206ENST00000611833 H3BRN7 92 aa13.6□□□□□ -0.23
NEK3-206ENST00000611833 IGLV2-11P01706 119 aa13.6□□□□□ -0.23
NEK3-206ENST00000611833 FBLN7Q53RD9 439 aa13.6□□□□□ -0.23
NEK3-206ENST00000611833 ZNF491Q8N8L2 437 aa13.6□□□□□ -0.23
NEK3-206ENST00000611833 FAM181BA6NEQ2 426 aa13.59□□□□□ -0.23
NEK3-206ENST00000611833 M0R1W7 72 aa13.59□□□□□ -0.23
NEK3-206ENST00000611833 NDUFA3O95167 84 aa13.59□□□□□ -0.23
NEK3-206ENST00000611833 FCGR2BP31994 310 aaPredicted RBP13.59□□□□□ -0.23
NEK3-206ENST00000611833 CTRLP40313 264 aa13.59□□□□□ -0.23
NEK3-206ENST00000611833 FOXA3P55318 350 aaPredicted RBP13.59□□□□□ -0.23
NEK3-206ENST00000611833 COL25A1Q9BXS0 654 aaPredicted RBP13.59□□□□□ -0.23
NEK3-206ENST00000611833 NBASA2RRP1 2371 aa13.59□□□□□ -0.23
NEK3-206ENST00000611833 FAM231BA6NCW3 169 aa13.59□□□□□ -0.23
NEK3-206ENST00000611833 CHEK1O14757 476 aa13.59□□□□□ -0.23
NEK3-206ENST00000611833 GNG7O60262 68 aa13.59□□□□□ -0.23
NEK3-206ENST00000611833 NPIPB6E9PJ23 425 aa13.58□□□□□ -0.23
NEK3-206ENST00000611833 K7EQM0 130 aa13.58□□□□□ -0.23
NEK3-206ENST00000611833 HLA-DRB1P01911 266 aa13.58□□□□□ -0.23
NEK3-206ENST00000611833 PRTN3P24158 256 aa13.58□□□□□ -0.23
NEK3-206ENST00000611833 BATFQ16520 125 aa13.58□□□□□ -0.23
NEK3-206ENST00000611833 C5orf64Q2M2E5 130 aa13.58□□□□□ -0.23
NEK3-206ENST00000611833 FAM162BQ5T6X4 162 aa13.58□□□□□ -0.23
NEK3-206ENST00000611833 ATOH7Q8N100 152 aa13.58□□□□□ -0.23
NEK3-206ENST00000611833 ODF3BA8MYP8 253 aa13.58□□□□□ -0.24
NEK3-206ENST00000611833 RPLP1P05386 114 aaKnown RBP13.58□□□□□ -0.24
NEK3-206ENST00000611833 IGLC2P0DOY2 106 aa13.58□□□□□ -0.24
NEK3-206ENST00000611833 LCN12Q6JVE5 192 aa13.58□□□□□ -0.24
NEK3-206ENST00000611833 ATRXP46100 2492 aa13.58□□□□□ -0.24
NEK3-206ENST00000611833 CSMD1Q96PZ7 3565 aa13.58□□□□□ -0.24
NEK3-206ENST00000611833 NCBP2LA6PVI3 153 aaKnown RBP13.57□□□□□ -0.24
NEK3-206ENST00000611833 HOXB4P17483 251 aaPredicted RBP13.57□□□□□ -0.24
NEK3-206ENST00000611833 BTF3P20290 206 aaKnown RBP13.57□□□□□ -0.24
NEK3-206ENST00000611833 PMCHL1Q16048 86 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 NEU4Q8WWR8 484 aaPredicted RBP13.57□□□□□ -0.24
NEK3-206ENST00000611833 TRAV30A0A087WSZ9 112 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 TRBV6-1A0A0K0K1D8 114 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 PRB4P10163 310 aaPredicted RBP13.57□□□□□ -0.24
NEK3-206ENST00000611833 G0S2P27469 103 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 EBLN2Q6P2I7 272 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 SIGLEC15Q6ZMC9 328 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 Q71RC1 249 aaPredicted RBP13.57□□□□□ -0.24
NEK3-206ENST00000611833 S100A7AQ86SG5 101 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 LYPD1Q8N2G4 141 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 TMEM75Q8N9X5 138 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 TMEM190Q8WZ59 177 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 UQCR10Q9UDW1 63 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 ZFP30Q9Y2G7 519 aa13.57□□□□□ -0.24
NEK3-206ENST00000611833 WI2-2373I1.2A0A1W2PRP0 233 aa13.56□□□□□ -0.24
NEK3-206ENST00000611833 MFAP4P55083 255 aa13.56□□□□□ -0.24
NEK3-206ENST00000611833 Q56UQ5 140 aa13.56□□□□□ -0.24
NEK3-206ENST00000611833 KLHDC1Q8N7A1 406 aa13.56□□□□□ -0.24
NEK3-206ENST00000611833 ZC2HC1AQ96GY0 325 aa13.56□□□□□ -0.24
NEK3-206ENST00000611833 TXN2Q99757 166 aa13.56□□□□□ -0.24
NEK3-206ENST00000611833 ARPC1AQ92747 370 aa13.56□□□□□ -0.24
NEK3-206ENST00000611833 ASCL2Q99929 193 aa13.56□□□□□ -0.24
NEK3-206ENST00000611833 PSG8Q9UQ74 426 aa13.56□□□□□ -0.24
NEK3-206ENST00000611833 M0QZ24 198 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 IGLC3P0DOY3 106 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 ZNF562Q6V9R5 426 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 URB1-AS1Q96HZ7 61 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 ZNF414Q96IQ9 312 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 IGLV11-55A0A075B6I3 123 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 NPIPB5A8MRT5 1133 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 HAX1O00165 279 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 PSG3Q16557 428 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 CCDC144NLQ6NUI1 221 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 VMO1Q7Z5L0 202 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 FANCD2OSQ96PS1 177 aa13.55□□□□□ -0.24
NEK3-206ENST00000611833 LOC102724200A0A096LPH7 203 aaPredicted RBP13.54□□□□□ -0.24
NEK3-206ENST00000611833 Q6ZN92 141 aa13.54□□□□□ -0.24
NEK3-206ENST00000611833 KIR3DL3Q8N743 410 aa13.54□□□□□ -0.24
NEK3-206ENST00000611833 CLEC5AQ9NY25 188 aa13.54□□□□□ -0.24
NEK3-206ENST00000611833 C2orf70A6NJV1 201 aa13.53□□□□□ -0.24
NEK3-206ENST00000611833 MRPS12O15235 138 aaKnown RBP13.53□□□□□ -0.24
NEK3-206ENST00000611833 ZNF25P17030 456 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms