RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571		Q6ZPA2	131 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	TPSG1	Q9NRR2	321 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571		D6R8Y8	96 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	LMO1	P25800	156 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	LEP	P41159	167 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	PDLIM4	P50479	330 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	HERVK_113	P61574	105 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	MAJIN	Q3KP22	176 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	NHP2	Q9NX24	153 aa	Known RBP	11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	IGHV2-26	A0A0B4J1V2	119 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	FRMD6-AS1	P0C7T7	363 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	FAM168A	Q92567	244 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	RCHY1	Q96PM5	261 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	FAM90A9P	A6NNJ1	464 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	TMEM178B	H3BS89	294 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	ADIPOQ	Q15848	244 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	C8orf46	Q8TAG6	207 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	OR11H12	B2RN74	326 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	APOM	O95445	188 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	SLC25A48	Q6ZT89	311 aa	Known RBP	11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	OR11H1	Q8NG94	326 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	OR11H2	Q8NH07	326 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	SPCS1	Q9Y6A9	102 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	RIPPLY3	P57055	190 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	TMEM170B	Q5T4T1	132 aa		11.24	□□□□□ -0.61
MUC1-223	ENST00000611571	ATP5G2	Q06055	141 aa		11.23	□□□□□ -0.61
MUC1-223	ENST00000611571	C18orf32	Q8TCD1	76 aa		11.23	□□□□□ -0.61
MUC1-223	ENST00000611571	NAV2	Q8IVL1	2488 aa		11.23	□□□□□ -0.61
MUC1-223	ENST00000611571		A0A0G2JNJ9	132 aa		11.23	□□□□□ -0.61
MUC1-223	ENST00000611571	WT1-AS	Q06250	92 aa		11.23	□□□□□ -0.61
MUC1-223	ENST00000611571	LYZL1	Q6UWQ5	148 aa		11.23	□□□□□ -0.61
MUC1-223	ENST00000611571	TMEM167A	Q8TBQ9	72 aa		11.23	□□□□□ -0.61
MUC1-223	ENST00000611571		Q9UFV3	132 aa		11.23	□□□□□ -0.61
MUC1-223	ENST00000611571	XIRP2	A4UGR9	3374 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	IGHV1-3	A0A0C4DH29	117 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	RHOG	P84095	191 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	TMEM219	Q86XT9	240 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	AMN1	Q8IY45	258 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	C15orf65	H3BRN8	121 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	ARMS2	P0C7Q2	107 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	SMIM13	P0DJ93	91 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	STPG4	Q8N801	248 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	JMJD8	Q96S16	334 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	TMEM14B	Q9NUH8	114 aa		11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	RPS20	P60866	119 aa	Known RBP	11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	ZNF672	Q499Z4	452 aa	Predicted RBP	11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	PRR30	Q53SZ7	412 aa	Predicted RBP	11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	ZNF418	Q8TF45	676 aa	Predicted RBP	11.22	□□□□□ -0.61
MUC1-223	ENST00000611571	FABP5P3	A8MUU1	101 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	COL8A2	P25067	703 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	RPL13A	P40429	203 aa	Known RBP	11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	GUSBP1	Q15486	140 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	C17orf58	Q2M2W7	97 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	VKORC1	Q9BQB6	163 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571		K7EN84	100 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	SSBP2	P81877	361 aa	Predicted RBP	11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	NDP	Q00604	133 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	IFI27L1	Q96BM0	104 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	SIGLEC9	Q9Y336	463 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571		V9GYV3	84 aa		11.21	□□□□□ -0.61
MUC1-223	ENST00000611571	C11orf53	Q8IXP5	236 aa		11.21	□□□□□ -0.62
MUC1-223	ENST00000611571	HIVEP2	P31629	2446 aa		11.21	□□□□□ -0.62
MUC1-223	ENST00000611571	OBSL1	O75147	1896 aa		11.21	□□□□□ -0.62
MUC1-223	ENST00000611571	ZNF56	Q15929	161 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	IGHG3	P01860	377 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	SFTPC	P11686	197 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	ATP5J2	P56134	94 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	CRIP3	Q6Q6R5	217 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	ZNF329	Q86UD4	541 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	SCGB3A1	Q96QR1	104 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571		Q8NFD4	153 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	RNF138	Q8WVD3	245 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	SYS1-DBNDD2	H3BUS1	97 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	OR5AN1	Q8NGI8	311 aa		11.2	□□□□□ -0.62
MUC1-223	ENST00000611571	HBD	P02042	147 aa		11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	CLEC2A	Q6UVW9	174 aa		11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	GTSCR1	Q86UQ5	136 aa		11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	WT1	P19544	449 aa	Predicted RBP	11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	RNASE4	P34096	147 aa	Known RBP	11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	CFHR2	P36980	270 aa		11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	TTC9C	Q8N5M4	171 aa		11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	RAX	Q9Y2V3	346 aa		11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	SOX21	Q9Y651	276 aa	Predicted RBP	11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	IFI27	P40305	119 aa	Predicted RBP	11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	FAM159A	Q6UWV7	190 aa		11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	FAM169B	Q8N8A8	192 aa		11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	EEF1AKMT3	Q96AZ1	226 aa		11.19	□□□□□ -0.62
MUC1-223	ENST00000611571	TMEM213	A2RRL7	107 aa		11.18	□□□□□ -0.62
MUC1-223	ENST00000611571	C15orf32	Q32M92	178 aa		11.18	□□□□□ -0.62
MUC1-223	ENST00000611571	IGKV3OR2-268	A0A0C4DH90	116 aa		11.18	□□□□□ -0.62
MUC1-223	ENST00000611571		A0A1B0GWB2	263 aa		11.18	□□□□□ -0.62
MUC1-223	ENST00000611571		A0A1B0GWJ7	208 aa		11.18	□□□□□ -0.62
MUC1-223	ENST00000611571	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.18	□□□□□ -0.62
MUC1-223	ENST00000611571	MBD3L3	A6NE82	208 aa	Predicted RBP	11.18	□□□□□ -0.62
MUC1-223	ENST00000611571	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.18	□□□□□ -0.62
MUC1-223	ENST00000611571	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.18	□□□□□ -0.62
MUC1-223	ENST00000611571	EBLN2	Q6P2I7	272 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms