RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 YPEL3P61236 119 aaPredicted RBP3.1□□□□□ -1.91
LINC00397-202ENST00000606785 HERVK_113P63121 156 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 PLGLB1Q02325 96 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 Q0VG73 95 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 EIF3IQ13347 325 aaKnown RBP3.1□□□□□ -1.91
LINC00397-202ENST00000606785 ABCA11PQ4W5N1 156 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 FKBP1CQ5VVH2 108 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 DGAT2L6Q6ZPD8 337 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 Q6ZRU5 148 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 CLEC20AQ6ZU45 233 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 LINC00596Q86U02 117 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 MUCL1Q96DR8 90 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 AK3Q9UIJ7 227 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 WASHC3Q9Y3C0 194 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 IQGAP3Q86VI3 1631 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 ADCY10Q96PN6 1610 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 RBBP6Q7Z6E9 1792 aaKnown RBP3.1□□□□□ -1.91
LINC00397-202ENST00000606785 UBR2Q8IWV8 1755 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 PTPRKQ15262 1439 aa3.1□□□□□ -1.91
LINC00397-202ENST00000606785 NUP210Q8TEM1 1887 aaPredicted RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 EFCAB5A4FU69 1503 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 DIP2BQ9P265 1576 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 ZNF142P52746 1687 aaPredicted RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 TRAV8-2A0A0B4J237 113 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 TRAV4A0A0B4J268 109 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 A0A0G2JND7 137 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 ARRDC5A6NEK1 342 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 TMEM250H0YL14 139 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 GSTZ1O43708 216 aaPredicted RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 YPEL1O60688 119 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 HYPMO75409 117 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 ZNF324O75467 553 aaPredicted RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 DEDDO75618 318 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 HLA-DRB1P01911 266 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 CD28P10747 220 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 CTLA4P16410 223 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 FKBP2P26885 142 aaKnown RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 PSMB8P28062 276 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 FOXA3P55318 350 aaPredicted RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 TMEM258P61165 79 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 SEC11AP67812 179 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 EBI3Q14213 229 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 DIAPH2-AS1Q14236 149 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 SP6Q3SY56 376 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 VMA21Q3ZAQ7 101 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 Q6ZS92 163 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 SHISA6Q6ZSJ9 500 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 DAZ4Q86SG3 579 aaKnown RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 LHFPL1Q86WI0 220 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 ATOH7Q8N100 152 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 OR4K13Q8NH42 304 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 C2orf15Q8WU43 125 aaKnown RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 KLK6Q92876 244 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 SLC25A44Q96H78 314 aaPredicted RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 YPEL2Q96QA6 119 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 SLC25A21Q9BQT8 299 aaPredicted RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 ST20Q9HBF5 79 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 DAZ1Q9NQZ3 744 aaKnown RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 OR5V1Q9UGF6 321 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 RPUSD1Q9UJJ7 312 aaKnown RBP3.09□□□□□ -1.91
LINC00397-202ENST00000606785 FIS1Q9Y3D6 152 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 SHANK3Q9BYB0 1731 aa3.09□□□□□ -1.91
LINC00397-202ENST00000606785 ITGB4P16144 1822 aa3.09□□□□□ -1.92
LINC00397-202ENST00000606785 KIAA0586Q9BVV6 1533 aa3.09□□□□□ -1.92
LINC00397-202ENST00000606785 CEP170BQ9Y4F5 1589 aaPredicted RBP3.08□□□□□ -1.92
LINC00397-202ENST00000606785 ADGBQ8N7X0 1667 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 MARF1Q9Y4F3 1742 aaKnown RBP3.08□□□□□ -1.92
LINC00397-202ENST00000606785 TRBV19A0A075B6N1 114 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 TRAV8-3A0A0A6YYJ7 113 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 FAM236AA0A1B0GUQ0 79 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 FAM236BA0A1B0GV22 79 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 H3BRM9 83 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 GABARAPH6UMI1 98 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 GEMIN2O14893 280 aaKnown RBP3.08□□□□□ -1.92
LINC00397-202ENST00000606785 UQCRQO14949 82 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 LYZL6O75951 148 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 EPPINO95925 133 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 NAPSAO96009 420 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 MT-ND6P03923 174 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 MT-ATP8P03928 68 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 TRGC2P03986 189 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 IL4P05112 153 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 SLC25A6P12236 298 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 CRYGSP22914 178 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 GADD45AP24522 165 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 INPP1P49441 399 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 POLR2JP52435 117 aaKnown RBP3.08□□□□□ -1.92
LINC00397-202ENST00000606785 C1QTNF8P60827 252 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 RPS24P62847 133 aaKnown RBP3.08□□□□□ -1.92
LINC00397-202ENST00000606785 ZNF90Q03938 601 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 ZNF345Q14585 488 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 RRN3P1Q2M238 152 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 ZNF678Q5SXM1 525 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 AADACL3Q5VUY0 350 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 UNQ9165/PRO28630Q6UXU0 137 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 SCGB1D4Q6XE38 83 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 RPS19BP1Q86WX3 136 aaKnown RBP3.08□□□□□ -1.92
LINC00397-202ENST00000606785 C1orf174Q8IYL3 243 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 DEFB107AQ8IZN7 70 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 C10orf111Q8N326 155 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 353.8 ms