RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 MAP1LC3AQ9H492 121 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 TMEM14BQ9NUH8 114 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 FAM30AQ9NZY2 134 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 HILPDAQ9Y5L2 63 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 TRBV7-3A0A075B6L6 115 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 TRBV25-1A0A075B6N4 114 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 IGHV5-51A0A0C4DH38 117 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 A0A0J9YW62 118 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 SPTY2D1-AS1A0A0U1RR47 76 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 A0A1B0GUT8 65 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 C5orf49A4QMS7 147 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 C15orf61A6NNL5 157 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 NPIPB5A8MRT5 1133 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 C12orf77C9JDV5 145 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 SNAI2O43623 268 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 ATP5LO75964 103 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 OR2H2O95918 312 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 NGFP01138 241 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 P01737 135 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 HBDP02042 147 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF688P0C7X2 276 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 XGP55808 180 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 NDUFV3P56181 108 aaKnown RBP3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 ERVK-16P61578 105 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 ODF1Q14990 250 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 KLF17Q5JT82 389 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 LYRM7Q5U5X0 104 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 AAED1Q7RTV5 226 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 PPP1R27Q86WC6 154 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 FAM90A1Q86YD7 464 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 PCP2Q8IVA1 136 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 THAP8Q8NA92 274 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 TMEM178AQ8NBL3 297 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 FGFBP3Q8TAT2 258 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 ITLN1Q8WWA0 313 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 SSMEM1Q8WWF3 244 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 DLX4Q92988 240 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 FXYD5Q96DB9 178 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 DAZAP1Q96EP5 407 aaKnown RBP3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF414Q96IQ9 312 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 NAA38Q9BRA0 125 aaKnown RBP3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 PAXXQ9BUH6 204 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 CHAC1Q9BUX1 264 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 KRTAP1-5Q9BYS1 174 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 YAE1D1Q9NRH1 226 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 KLRF1Q9NZS2 232 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 MDFICQ9P1T7 246 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 PRNDQ9UKY0 176 aa3.22□□□□□ -1.89
HMGB1P50-201ENST00000605814 CABIN1Q9Y6J0 2220 aa3.21□□□□□ -1.89
HMGB1P50-201ENST00000605814 IGKV3D-15A0A087WSY6 115 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 A0A1W2PQF6 199 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 WI2-2373I1.2A0A1W2PRP0 233 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 PRSS29PA6NIE9 313 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 PCNX2A6NKB5 2137 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 C16orf97H3BN30 126 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 C15orf65H3BRN8 121 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 FCN3O75636 299 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 MOSP00540 346 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGLV3-19P01714 112 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 IFITM1P13164 125 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 CA6P23280 308 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 FCER1GP30273 86 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 CXCL12P48061 93 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 INSL3P51460 131 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 UBE2D3P61077 147 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 UBE2D2P62837 147 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 PRCDQ00LT1 54 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 SRSF2Q01130 221 aaKnown RBP3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 GAGE2BQ13066 116 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 GAGE2EQ4V326 116 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 ZNF766Q5HY98 468 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 TMEM78Q5T7P6 136 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 FAM104BQ5XKR9 115 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 PVRIGQ6DKI7 326 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 LINC00322Q6ZN03 302 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 COX8CQ7Z4L0 72 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 NFE4Q86UQ8 179 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 SMIM20Q8N5G0 67 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 PTH2Q96A98 100 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 PGLYRP4Q96LB8 373 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 DNAJC30Q96LL9 226 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 IFI27L2Q9H2X8 130 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 ENY2Q9NPA8 101 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 B4GALT7Q9UBV7 327 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 GAGE2DQ9UEU5 116 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 SIGLEC9Q9Y336 463 aa3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 CHCHD2Q9Y6H1 151 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGKV1OR2-108A0A075B7D4 117 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 MYMXA0A1B0GTQ4 84 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 A0A1B0GX51 115 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 A0A1W2PPI3 338 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 PGPA6NDG6 321 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 UPK2O00526 184 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 ACTL6BO94805 426 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGKCP01834 107 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 CGB3P0DN86 165 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 CGB7P0DN87 165 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 LIFP15018 202 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 COL8A2P25067 703 aa3.2□□□□□ -1.9
HMGB1P50-201ENST00000605814 IFI27P40305 119 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms