RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 FAM78BQ5VT40 261 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 Q6ZTC4 211 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 S100A7AQ86SG5 101 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 ZNF709Q8N972 641 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 C20orf173Q96LM9 149 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 SHANK2-AS3Q9BTD1 123 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 TRAV10A0A0B4J240 114 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 C7orf66A4D0T2 115 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 IGLL5B9A064 214 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 L7N2F9 121 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 OR5G3P0C626 314 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 RPL7P18124 248 aaKnown RBP13.05□□□□□ -0.32
CCDC12-208ENST00000603885 VAMP2P63027 116 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 PSG9Q00887 426 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 TEPPQ6URK8 271 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
CCDC12-208ENST00000603885 C17orf77Q96MU5 243 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 NEU1Q99519 415 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 SLC35B3Q9H1N7 401 aa13.05□□□□□ -0.32
CCDC12-208ENST00000603885 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 SMIM9A6NGZ8 99 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 ZNF705FA8MVS1 300 aaPredicted RBP13.04□□□□□ -0.32
CCDC12-208ENST00000603885 K7EPK0 472 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 ZNF705DP0CH99 300 aaPredicted RBP13.04□□□□□ -0.32
CCDC12-208ENST00000603885 ZNF705BP0CI00 300 aaPredicted RBP13.04□□□□□ -0.32
CCDC12-208ENST00000603885 SLC38A11Q08AI6 406 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 LINC00299Q6ZSB3 139 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 SEC22CQ9BRL7 303 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 GGACTQ9BVM4 153 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 CELA1Q9UNI1 258 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 VPS13DQ5THJ4 4388 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 BIRC6Q9NR09 4857 aa13.04□□□□□ -0.32
CCDC12-208ENST00000603885 C5orf51A6NDU8 294 aa13.03□□□□□ -0.32
CCDC12-208ENST00000603885 H2AFB2P0C5Z0 115 aa13.03□□□□□ -0.32
CCDC12-208ENST00000603885 FGL1Q08830 312 aa13.03□□□□□ -0.32
CCDC12-208ENST00000603885 C12orf45Q8N5I9 185 aaPredicted RBP13.03□□□□□ -0.32
CCDC12-208ENST00000603885 UHRF2Q96PU4 802 aa13.03□□□□□ -0.32
CCDC12-208ENST00000603885 ARL6Q9H0F7 186 aa13.03□□□□□ -0.32
CCDC12-208ENST00000603885 RNF24Q9Y225 148 aa13.03□□□□□ -0.32
CCDC12-208ENST00000603885 GOLT1BQ9Y3E0 138 aa13.03□□□□□ -0.32
CCDC12-208ENST00000603885 LSM5Q9Y4Y9 91 aaKnown RBP13.03□□□□□ -0.32
CCDC12-208ENST00000603885 FAM240BA0A1B0GVZ2 78 aa13.02□□□□□ -0.33
CCDC12-208ENST00000603885 TMEM189A5PLL7 270 aa13.02□□□□□ -0.33
CCDC12-208ENST00000603885 GOSR2O14653 212 aa13.02□□□□□ -0.33
CCDC12-208ENST00000603885 DEDDO75618 318 aa13.02□□□□□ -0.33
CCDC12-208ENST00000603885 ARL16Q0P5N6 197 aa13.02□□□□□ -0.33
CCDC12-208ENST00000603885 ZNF546Q86UE3 836 aa13.02□□□□□ -0.33
CCDC12-208ENST00000603885 RPP25LQ8N5L8 163 aaKnown RBP13.02□□□□□ -0.33
CCDC12-208ENST00000603885 S100ZQ8WXG8 99 aa13.02□□□□□ -0.33
CCDC12-208ENST00000603885 APLNQ9ULZ1 77 aa13.02□□□□□ -0.33
CCDC12-208ENST00000603885 RFNGQ9Y644 331 aa13.02□□□□□ -0.33
CCDC12-208ENST00000603885 BCAP31P51572 246 aa13.01□□□□□ -0.33
CCDC12-208ENST00000603885 C12orf74Q32Q52 190 aa13.01□□□□□ -0.33
CCDC12-208ENST00000603885 PXDC1Q5TGL8 231 aa13.01□□□□□ -0.33
CCDC12-208ENST00000603885 MZT2BQ6NZ67 158 aa13.01□□□□□ -0.33
CCDC12-208ENST00000603885 ZNF767PQ75MW2 155 aa13.01□□□□□ -0.33
CCDC12-208ENST00000603885 ARV1Q9H2C2 271 aa13.01□□□□□ -0.33
CCDC12-208ENST00000603885 DNAH6Q9C0G6 4158 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 TRAV8-2A0A0B4J237 113 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 A8MTW9 85 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 AGPAT2O15120 278 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 DUSP14O95147 198 aaKnown RBP13□□□□□ -0.33
CCDC12-208ENST00000603885 SPART-AS1P0CW21 52 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 CAV2P51636 162 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 EMP1P54849 157 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 IGFL4Q6B9Z1 124 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 RNF182Q8N6D2 247 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 C2orf50Q96LR7 162 aa13□□□□□ -0.33
CCDC12-208ENST00000603885 IGHV4-4A0A075B6R2 117 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 A0A087X0K7 114 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 DEFB131BA0A096LNP1 70 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 HBE1P02100 147 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 AMBPP02760 352 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 PVALBP20472 110 aaPredicted RBP12.99□□□□□ -0.33
CCDC12-208ENST00000603885 CNN1P51911 297 aaKnown RBP12.99□□□□□ -0.33
CCDC12-208ENST00000603885 AMTNQ6UX39 209 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 PATE2Q6UY27 113 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 ZNF738Q8NE65 137 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 LRRC20Q8TCA0 184 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 RNF126Q9BV68 326 aa12.99□□□□□ -0.33
CCDC12-208ENST00000603885 TEX48A0A1B0GUV7 120 aa12.98□□□□□ -0.33
CCDC12-208ENST00000603885 ASAH1Q13510 395 aa12.98□□□□□ -0.33
CCDC12-208ENST00000603885 LINC00305Q7Z4B0 112 aa12.98□□□□□ -0.33
CCDC12-208ENST00000603885 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
CCDC12-208ENST00000603885 OR11H7Q8NGC8 314 aa12.98□□□□□ -0.33
CCDC12-208ENST00000603885 IGF2BP2-AS1Q96M15 143 aa12.98□□□□□ -0.33
CCDC12-208ENST00000603885 MGST2Q99735 147 aa12.98□□□□□ -0.33
CCDC12-208ENST00000603885 TMEM208Q9BTX3 173 aa12.98□□□□□ -0.33
CCDC12-208ENST00000603885 COX7A2P2O60397 106 aa12.97□□□□□ -0.33
CCDC12-208ENST00000603885 CST7O76096 145 aa12.97□□□□□ -0.33
CCDC12-208ENST00000603885 CXCL3P19876 107 aa12.97□□□□□ -0.33
CCDC12-208ENST00000603885 S100A10P60903 97 aa12.97□□□□□ -0.33
CCDC12-208ENST00000603885 RAB31Q13636 194 aa12.97□□□□□ -0.33
CCDC12-208ENST00000603885 C11orf1Q9H5F2 150 aa12.97□□□□□ -0.33
CCDC12-208ENST00000603885 FRAS1Q86XX4 4008 aa12.97□□□□□ -0.33
CCDC12-208ENST00000603885 LOC102723971A0A1B0GUV8 181 aa12.96□□□□□ -0.33
CCDC12-208ENST00000603885 FAM24AA6NFZ4 105 aa12.96□□□□□ -0.33
CCDC12-208ENST00000603885 CAMLGP49069 296 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms