RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 IGKV1D-42A0A075B6H8 117 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 K7ESM1 405 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 HSPB6O14558 160 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 FCGR3BO75015 233 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 TCL1BO95988 128 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 RPS18P62269 152 aaKnown RBP7.05□□□□□ -1.28
COMMD3-215ENST00000602574 IZUMO4Q1ZYL8 232 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 RALGAPA1Q6GYQ0 2036 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 PCSK4Q6UW60 755 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 TMEM52Q8NDY8 209 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 PRDM6Q9NQX0 595 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 CACNG5Q9UF02 275 aa7.05□□□□□ -1.28
COMMD3-215ENST00000602574 C15orf61A6NNL5 157 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 C4orf51C9J302 202 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 DLL1O00548 723 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 RPL18Q07020 188 aaKnown RBP7.04□□□□□ -1.28
COMMD3-215ENST00000602574 HES3Q5TGS1 186 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 STHQ8IWL8 128 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 TPSG1Q9NRR2 321 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 TRAV12-2A0A075B6T6 113 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 A0A096LNJ9 63 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 FAM90A20PA6NIJ5 464 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 LINC01548A6NM66 108 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 HIGD1CA8MV81 97 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 H7C1H1 209 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 PLAUP00749 431 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 CCL11P51671 97 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 LINC01620Q4KN68 170 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 ZNF818PQ6ZRF7 136 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 RNF144BQ7Z419 303 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 DRAM1Q8N682 238 aa7.04□□□□□ -1.28
COMMD3-215ENST00000602574 KLF13Q9Y2Y9 288 aaPredicted RBP7.04□□□□□ -1.28
COMMD3-215ENST00000602574 PYYP10082 97 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 KISS1Q15726 138 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 CRIP3Q6Q6R5 217 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 SFTPA2Q8IWL1 248 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 SFTPA1Q8IWL2 248 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 OR8A1Q8NGG7 326 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 MGST2Q99735 147 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 LINC00527Q9UJ94 153 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 HHLA3Q9XRX5 114 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 TMEM150CB9EJG8 249 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 WISP2O76076 250 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 HBDP02042 147 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 KRTAP27-1Q3LI81 207 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 C5orf38Q86SI9 138 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 LINC00311Q8N616 119 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 IL17DQ8TAD2 202 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 NABP1Q96AH0 204 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 ZNF503Q96F45 646 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 PRDM14Q9GZV8 571 aa7.03□□□□□ -1.28
COMMD3-215ENST00000602574 IGKV2D-26A0A0A0MRZ7 120 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 LOC101059948A0A1B0GTJ6 334 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 H3BMM0 161 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 ZNF823P16415 610 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 CA6P23280 308 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 LOXP28300 417 aaPredicted RBP7.02□□□□□ -1.29
COMMD3-215ENST00000602574 LOXL1Q08397 574 aaPredicted RBP7.02□□□□□ -1.29
COMMD3-215ENST00000602574 VMA21Q3ZAQ7 101 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 Q6ZRM9 215 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 UBE2WQ96B02 151 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 UPK3BQ9BT76 320 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 PHPT1Q9NRX4 125 aaPredicted RBP7.02□□□□□ -1.29
COMMD3-215ENST00000602574 SERP1Q9Y6X1 66 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 LOC107984156A0A0G2JMH3 177 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 hADV29S1A0JD25 119 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 SPINT2O43291 252 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 EMDP50402 254 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 ADORA2A-AS1P86434 159 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 RNF44Q7L0R7 432 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 VN1R4Q7Z5H5 301 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 ARL17AQ8IVW1 177 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 SPACA5Q96QH8 159 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 FOXQ1Q9C009 403 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 RETNQ9HD89 108 aa7.02□□□□□ -1.29
COMMD3-215ENST00000602574 IGKV1-9A0A0C4DH69 117 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 C5orf63A6NC05 138 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 CTLA4P16410 223 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 FKBP2P26885 142 aaKnown RBP7.01□□□□□ -1.29
COMMD3-215ENST00000602574 ZFP2Q6ZN57 461 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 LINC00643Q86TS7 51 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 NTN5Q8WTR8 489 aaPredicted RBP7.01□□□□□ -1.29
COMMD3-215ENST00000602574 FAM168AQ92567 244 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 LINC01549A6NIU2 74 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 H3BVH4 76 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 LEPP41159 167 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 UBE2L3P68036 154 aaKnown RBP7.01□□□□□ -1.29
COMMD3-215ENST00000602574 CCL8P80075 99 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 PMAIP1Q13794 54 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 ZNF56Q15929 161 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 NEXN-AS1Q8NBZ9 246 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 PRSS22Q9GZN4 317 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 DPH3P1Q9H4G8 78 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 C16orf95Q9H693 158 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 C6orf106Q9H6K1 298 aaPredicted RBP7.01□□□□□ -1.29
COMMD3-215ENST00000602574 C7orf69Q9H7B7 122 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 ZNF355PQ9NSJ1 428 aa7.01□□□□□ -1.29
COMMD3-215ENST00000602574 TMSB15BA0A087X1C1 80 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 228.5 ms