RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 DEFB1P60022 68 aa14.77□□□□□ -0.05
SSBP4-210ENST00000601444 PXDC1Q5TGL8 231 aa14.77□□□□□ -0.05
SSBP4-210ENST00000601444 CHAC2Q8WUX2 184 aa14.77□□□□□ -0.05
SSBP4-210ENST00000601444 NPCDR1Q9BY65 106 aa14.77□□□□□ -0.05
SSBP4-210ENST00000601444 SLC39A9Q9NUM3 307 aa14.77□□□□□ -0.05
SSBP4-210ENST00000601444 PXMP4Q9Y6I8 212 aa14.77□□□□□ -0.05
SSBP4-210ENST00000601444 TENM3Q9P273 2699 aa14.77□□□□□ -0.05
SSBP4-210ENST00000601444 GIPP09681 153 aaPredicted RBP14.76□□□□□ -0.05
SSBP4-210ENST00000601444 APOC4P55056 127 aa14.76□□□□□ -0.05
SSBP4-210ENST00000601444 B2MP61769 119 aa14.76□□□□□ -0.05
SSBP4-210ENST00000601444 SNRPD3P62318 126 aaKnown RBP14.76□□□□□ -0.05
SSBP4-210ENST00000601444 ACTL10Q5JWF8 245 aa14.76□□□□□ -0.05
SSBP4-210ENST00000601444 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.76□□□□□ -0.05
SSBP4-210ENST00000601444 Q6ZRG5 221 aa14.76□□□□□ -0.05
SSBP4-210ENST00000601444 LINC00052Q96N35 136 aa14.76□□□□□ -0.05
SSBP4-210ENST00000601444 WDR61Q9GZS3 305 aaKnown RBP14.76□□□□□ -0.05
SSBP4-210ENST00000601444 WFDC1Q9HC57 220 aa14.76□□□□□ -0.05
SSBP4-210ENST00000601444 DNAJC4Q9NNZ3 241 aa14.76□□□□□ -0.05
SSBP4-210ENST00000601444 S100A7P31151 101 aa14.75□□□□□ -0.05
SSBP4-210ENST00000601444 C10orf113Q5VZT2 155 aa14.75□□□□□ -0.05
SSBP4-210ENST00000601444 STHQ8IWL8 128 aa14.75□□□□□ -0.05
SSBP4-210ENST00000601444 GPR82Q96P67 336 aa14.75□□□□□ -0.05
SSBP4-210ENST00000601444 ATP5SQ99766 215 aa14.75□□□□□ -0.05
SSBP4-210ENST00000601444 OVOL2Q9BRP0 275 aa14.75□□□□□ -0.05
SSBP4-210ENST00000601444 SEPSECSQ9HD40 501 aaKnown RBP14.75□□□□□ -0.05
SSBP4-210ENST00000601444 ELOA3CA0A087WX78 387 aaPredicted RBP14.74□□□□□ -0.05
SSBP4-210ENST00000601444 TRAV5A0A0B4J249 113 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 KIR2DL5BA0A0G2JN68 375 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 KIR2DL5BA0A0G2JPC4 375 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 MRPS12O15235 138 aaKnown RBP14.74□□□□□ -0.05
SSBP4-210ENST00000601444 MPDU1O75352 247 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 SNRPCP09234 159 aaKnown RBP14.74□□□□□ -0.05
SSBP4-210ENST00000601444 FGL1Q08830 312 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 DEFB135Q30KP9 77 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 GCSAMLQ5JQS6 135 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 IGFL4Q6B9Z1 124 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 TRPT1Q86TN4 253 aaKnown RBP14.74□□□□□ -0.05
SSBP4-210ENST00000601444 KIR2DL5AQ8N109 375 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 KIR2DL5BQ8NHK3 375 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 C20orf173Q96LM9 149 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 WWC2-AS2Q96NR7 200 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 CSTL1Q9H114 145 aa14.74□□□□□ -0.05
SSBP4-210ENST00000601444 RPL7P18124 248 aaKnown RBP14.73□□□□□ -0.05
SSBP4-210ENST00000601444 ID1P41134 155 aa14.73□□□□□ -0.05
SSBP4-210ENST00000601444 PSMB3P49720 205 aa14.73□□□□□ -0.05
SSBP4-210ENST00000601444 GDF5OSQ5U4N7 250 aa14.73□□□□□ -0.05
SSBP4-210ENST00000601444 C16orf92Q96LL3 132 aa14.73□□□□□ -0.05
SSBP4-210ENST00000601444 TRAV8-2A0A0B4J237 113 aa14.72□□□□□ -0.05
SSBP4-210ENST00000601444 ISLRO14498 428 aa14.72□□□□□ -0.05
SSBP4-210ENST00000601444 ATF4P18848 351 aaPredicted RBP14.72□□□□□ -0.05
SSBP4-210ENST00000601444 S100A7AQ86SG5 101 aa14.72□□□□□ -0.05
SSBP4-210ENST00000601444 OR1L4Q8NGR5 311 aa14.72□□□□□ -0.05
SSBP4-210ENST00000601444 RFNGQ9Y644 331 aa14.72□□□□□ -0.05
SSBP4-210ENST00000601444 UBE2CO00762 179 aa14.71□□□□□ -0.05
SSBP4-210ENST00000601444 MEOX2P50222 304 aa14.71□□□□□ -0.05
SSBP4-210ENST00000601444 Q6ZWC4 215 aa14.71□□□□□ -0.05
SSBP4-210ENST00000601444 OR2T35Q8NGX2 323 aa14.71□□□□□ -0.05
SSBP4-210ENST00000601444 ASB13Q8WXK3 278 aa14.71□□□□□ -0.05
SSBP4-210ENST00000601444 F6UB75 175 aa14.7□□□□□ -0.06
SSBP4-210ENST00000601444 G3V3Q6 166 aa14.7□□□□□ -0.06
SSBP4-210ENST00000601444 SPRY2O43597 315 aa14.7□□□□□ -0.06
SSBP4-210ENST00000601444 CA1P00915 261 aaPredicted RBP14.7□□□□□ -0.06
SSBP4-210ENST00000601444 GIG44P09565 113 aaPredicted RBP14.7□□□□□ -0.06
SSBP4-210ENST00000601444 RNF182Q8N6D2 247 aa14.7□□□□□ -0.06
SSBP4-210ENST00000601444 PFDN5Q99471 154 aa14.7□□□□□ -0.06
SSBP4-210ENST00000601444 EDA2RQ9HAV5 297 aa14.7□□□□□ -0.06
SSBP4-210ENST00000601444 A0A087X0K7 114 aa14.69□□□□□ -0.06
SSBP4-210ENST00000601444 H3BMM0 161 aa14.69□□□□□ -0.06
SSBP4-210ENST00000601444 H3BTX0 84 aa14.69□□□□□ -0.06
SSBP4-210ENST00000601444 PRB4P10163 310 aaPredicted RBP14.69□□□□□ -0.06
SSBP4-210ENST00000601444 HLA-DMBP28068 263 aa14.69□□□□□ -0.06
SSBP4-210ENST00000601444 ZNF709Q8N972 641 aa14.69□□□□□ -0.06
SSBP4-210ENST00000601444 RNF183Q96D59 192 aa14.69□□□□□ -0.06
SSBP4-210ENST00000601444 AQP10Q96PS8 301 aa14.69□□□□□ -0.06
SSBP4-210ENST00000601444 H3BQ15 152 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 SMLR1H3BR10 107 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 IFNA5P01569 189 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 IGKV3-20P01619 116 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 C4BPBP20851 252 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 SPATA31B1PQ5VZV4 182 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 BPIFA4PQ86YQ2 179 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 SCGB1C1Q8TD33 95 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 GATAD1Q8WUU5 269 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 SAV1Q9H4B6 383 aaPredicted RBP14.68□□□□□ -0.06
SSBP4-210ENST00000601444 AGRNO00468 2067 aa14.68□□□□□ -0.06
SSBP4-210ENST00000601444 FXYD6-FXYD2A0A087WZ82 144 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 IGLC2P0DOY2 106 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 HLA-DRB4P13762 266 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 FAM78BQ5VT40 261 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 SAMD13Q5VXD3 122 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 FOXI2Q6ZQN5 318 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 RNF24Q9Y225 148 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 TP53TG1Q9Y2A0 90 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 HLA-DRB4X5D2U9 266 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 STAB2Q8WWQ8 2551 aa14.67□□□□□ -0.06
SSBP4-210ENST00000601444 RNF222A6NCQ9 220 aa14.66□□□□□ -0.06
SSBP4-210ENST00000601444 C17orf112F2Z3M2 114 aa14.66□□□□□ -0.06
SSBP4-210ENST00000601444 RPRMQ9NS64 109 aa14.66□□□□□ -0.06
SSBP4-210ENST00000601444 CLEC5AQ9NY25 188 aa14.66□□□□□ -0.06
SSBP4-210ENST00000601444 SLC17A3O00476 420 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms