RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 PLP1P60201 277 aa16.42■□□□□ 0.22
CCDC9-204ENST00000599398 NANOS2P60321 138 aaKnown RBP16.42■□□□□ 0.22
CCDC9-204ENST00000599398 FGL1Q08830 312 aa16.42■□□□□ 0.22
CCDC9-204ENST00000599398 RAB32Q13637 225 aa16.42■□□□□ 0.22
CCDC9-204ENST00000599398 CEMP1Q6PRD7 247 aaPredicted RBP16.42■□□□□ 0.22
CCDC9-204ENST00000599398 S100A7AQ86SG5 101 aa16.42■□□□□ 0.22
CCDC9-204ENST00000599398 ZNF546Q86UE3 836 aa16.42■□□□□ 0.22
CCDC9-204ENST00000599398 Q8NAQ8 132 aa16.42■□□□□ 0.22
CCDC9-204ENST00000599398 OR4B1Q8NGF8 309 aa16.42■□□□□ 0.22
CCDC9-204ENST00000599398 UHRF2Q96PU4 802 aa16.42■□□□□ 0.22
CCDC9-204ENST00000599398 IGHV4-28A0A0C4DH34 117 aa16.41■□□□□ 0.22
CCDC9-204ENST00000599398 AGPAT2O15120 278 aa16.41■□□□□ 0.22
CCDC9-204ENST00000599398 EBLN2Q6P2I7 272 aa16.41■□□□□ 0.22
CCDC9-204ENST00000599398 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.41■□□□□ 0.22
CCDC9-204ENST00000599398 NRARPQ7Z6K4 114 aa16.41■□□□□ 0.22
CCDC9-204ENST00000599398 CSNK1G2-AS1Q8NCQ2 148 aa16.41■□□□□ 0.22
CCDC9-204ENST00000599398 PHLDA1Q8WV24 401 aaPredicted RBP16.41■□□□□ 0.22
CCDC9-204ENST00000599398 MFFQ9GZY8 342 aa16.41■□□□□ 0.22
CCDC9-204ENST00000599398 C11orf1Q9H5F2 150 aa16.41■□□□□ 0.22
CCDC9-204ENST00000599398 RPRMQ9NS64 109 aa16.41■□□□□ 0.22
CCDC9-204ENST00000599398 KLK5Q9Y337 293 aaPredicted RBP16.41■□□□□ 0.22
CCDC9-204ENST00000599398 ZNF705EA8MWA4 302 aaPredicted RBP16.4■□□□□ 0.22
CCDC9-204ENST00000599398 F6UB75 175 aa16.4■□□□□ 0.22
CCDC9-204ENST00000599398 MIFP14174 115 aa16.4■□□□□ 0.22
CCDC9-204ENST00000599398 FXYD7P58549 80 aa16.4■□□□□ 0.22
CCDC9-204ENST00000599398 C20orf173Q96LM9 149 aa16.4■□□□□ 0.22
CCDC9-204ENST00000599398 C17orf77Q96MU5 243 aa16.4■□□□□ 0.22
CCDC9-204ENST00000599398 X6R8D5 127 aa16.4■□□□□ 0.22
CCDC9-204ENST00000599398 PLECQ15149 4684 aaKnown RBP16.4■□□□□ 0.22
CCDC9-204ENST00000599398 INMT-MINDY4F8WBC2 141 aa16.39■□□□□ 0.21
CCDC9-204ENST00000599398 RPL7P18124 248 aaKnown RBP16.39■□□□□ 0.21
CCDC9-204ENST00000599398 IL15RAQ13261 267 aa16.39■□□□□ 0.21
CCDC9-204ENST00000599398 SPATA31B1PQ5VZV4 182 aa16.39■□□□□ 0.21
CCDC9-204ENST00000599398 MGST2Q99735 147 aa16.39■□□□□ 0.21
CCDC9-204ENST00000599398 ARV1Q9H2C2 271 aa16.39■□□□□ 0.21
CCDC9-204ENST00000599398 LYRM2Q9NU23 88 aaPredicted RBP16.39■□□□□ 0.21
CCDC9-204ENST00000599398 PRAF2O60831 178 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 SIX6O95475 246 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 RBMY1A1P0DJD3 496 aaKnown RBP16.38■□□□□ 0.21
CCDC9-204ENST00000599398 RBMY1CP0DJD4 496 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 DEFA1P59665 94 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 DEFA3P59666 94 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 RAB31Q13636 194 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 RBMY1FQ15415 496 aaKnown RBP16.38■□□□□ 0.21
CCDC9-204ENST00000599398 PXDC1Q5TGL8 231 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 IGFL4Q6B9Z1 124 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 PATE2Q6UY27 113 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 STX12Q86Y82 276 aa16.38■□□□□ 0.21
CCDC9-204ENST00000599398 CAMLGP49069 296 aa16.37■□□□□ 0.21
CCDC9-204ENST00000599398 SULT1A1P50225 295 aa16.37■□□□□ 0.21
CCDC9-204ENST00000599398 FAM78BQ5VT40 261 aa16.37■□□□□ 0.21
CCDC9-204ENST00000599398 UQCC1Q9NVA1 299 aa16.37■□□□□ 0.21
CCDC9-204ENST00000599398 RNF24Q9Y225 148 aa16.37■□□□□ 0.21
CCDC9-204ENST00000599398 A0A0J9YX75 114 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 IGSF23A1L1A6 192 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 COX7A2P2O60397 106 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 HBG1P69891 147 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 HBG2P69892 147 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 PSG9Q00887 426 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 LINC00305Q7Z4B0 112 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 RNF182Q8N6D2 247 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 TMEM252Q8N6L7 170 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 ALMS1Q8TCU4 4167 aa16.36■□□□□ 0.21
CCDC9-204ENST00000599398 UBE2L5PA0A1B0GUS4 154 aa16.35■□□□□ 0.21
CCDC9-204ENST00000599398 S100A11P31949 105 aa16.35■□□□□ 0.21
CCDC9-204ENST00000599398 LRRC20Q8TCA0 184 aa16.35■□□□□ 0.21
CCDC9-204ENST00000599398 CLUHP3Q96NS8 147 aa16.35■□□□□ 0.21
CCDC9-204ENST00000599398 SLC35B3Q9H1N7 401 aa16.35■□□□□ 0.21
CCDC9-204ENST00000599398 IGHV3OR16-12A0A075B7B8 117 aa16.34■□□□□ 0.21
CCDC9-204ENST00000599398 TRAV8-2A0A0B4J237 113 aa16.34■□□□□ 0.21
CCDC9-204ENST00000599398 BAXQ07812 192 aa16.34■□□□□ 0.21
CCDC9-204ENST00000599398 ZNF709Q8N972 641 aa16.34■□□□□ 0.21
CCDC9-204ENST00000599398 MARVELD1Q9BSK0 173 aa16.34■□□□□ 0.21
CCDC9-204ENST00000599398 WDR83OSQ9Y284 106 aa16.34■□□□□ 0.21
CCDC9-204ENST00000599398 HYDINQ4G0P3 5121 aa16.33■□□□□ 0.21
CCDC9-204ENST00000599398 ELOA3CA0A087WX78 387 aaPredicted RBP16.33■□□□□ 0.2
CCDC9-204ENST00000599398 RLN2P04090 185 aa16.33■□□□□ 0.2
CCDC9-204ENST00000599398 LRRC37A5PQ49AS3 106 aa16.33■□□□□ 0.2
CCDC9-204ENST00000599398 C10orf113Q5VZT2 155 aa16.33■□□□□ 0.2
CCDC9-204ENST00000599398 MIC13Q5XKP0 118 aa16.33■□□□□ 0.2
CCDC9-204ENST00000599398 Q6ZRG5 221 aa16.33■□□□□ 0.2
CCDC9-204ENST00000599398 ZNF738Q8NE65 137 aa16.33■□□□□ 0.2
CCDC9-204ENST00000599398 DNAH1Q9P2D7 4330 aa16.32■□□□□ 0.2
CCDC9-204ENST00000599398 A0A087X0K7 114 aa16.32■□□□□ 0.2
CCDC9-204ENST00000599398 LY6G6CO95867 125 aa16.32■□□□□ 0.2
CCDC9-204ENST00000599398 VWC2Q2TAL6 325 aa16.32■□□□□ 0.2
CCDC9-204ENST00000599398 TMEM37Q8WXS4 190 aa16.32■□□□□ 0.2
CCDC9-204ENST00000599398 LINC00476Q8WZB0 136 aa16.32■□□□□ 0.2
CCDC9-204ENST00000599398 NMES1Q9C002 83 aa16.32■□□□□ 0.2
CCDC9-204ENST00000599398 HRH4Q9H3N8 390 aa16.32■□□□□ 0.2
CCDC9-204ENST00000599398 ATP6V1FQ16864 119 aa16.31■□□□□ 0.2
CCDC9-204ENST00000599398 ZNF705AQ6ZN79 300 aaPredicted RBP16.31■□□□□ 0.2
CCDC9-204ENST00000599398 E5RGE8 158 aa16.3■□□□□ 0.2
CCDC9-204ENST00000599398 SSNA1O43805 119 aa16.3■□□□□ 0.2
CCDC9-204ENST00000599398 DUSP14O95147 198 aaKnown RBP16.3■□□□□ 0.2
CCDC9-204ENST00000599398 SNRPCP09234 159 aaKnown RBP16.3■□□□□ 0.2
CCDC9-204ENST00000599398 ZNF705DP0CH99 300 aaPredicted RBP16.3■□□□□ 0.2
CCDC9-204ENST00000599398 ZNF705BP0CI00 300 aaPredicted RBP16.3■□□□□ 0.2
CCDC9-204ENST00000599398 FGF7P21781 194 aa16.3■□□□□ 0.2
CCDC9-204ENST00000599398 HLA-DMBP28068 263 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms