RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MGST2Q99735 147 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 MARVELD1Q9BSK0 173 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 ARL6Q9H0F7 186 aa13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 GPN1Q9HCN4 374 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-202ENST00000593764 ALMS1Q8TCU4 4167 aa13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 SIX6O95475 246 aa13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 OR5G3P0C626 314 aa13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 S100A7P31151 101 aa13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 RAP2BP61225 183 aa13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 SAMD13Q5VXD3 122 aa13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 FOXI2Q6ZQN5 318 aa13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 LYRM2Q9NU23 88 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 X6R8D5 127 aa13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 HYDINQ4G0P3 5121 aa13.41□□□□□ -0.26
SHKBP1-202ENST00000593764 IGSF23A1L1A6 192 aa13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 GOSR2O14653 212 aa13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 PRAF2O60831 178 aa13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 RBMY1A1P0DJD3 496 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 RBMY1CP0DJD4 496 aa13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 PVALBP20472 110 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 NUTF2P61970 127 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 RBMY1FQ15415 496 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 CEMP1Q6PRD7 247 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 TMEM252Q8N6L7 170 aa13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 C16orf92Q96LL3 132 aa13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 CLUHP3Q96NS8 147 aa13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 XCL2Q9UBD3 114 aa13.4□□□□□ -0.26
SHKBP1-202ENST00000593764 TRAV8-2A0A0B4J237 113 aa13.39□□□□□ -0.27
SHKBP1-202ENST00000593764 F6UB75 175 aa13.39□□□□□ -0.27
SHKBP1-202ENST00000593764 IGKV3-20P01619 116 aa13.39□□□□□ -0.27
SHKBP1-202ENST00000593764 SULT1A1P50225 295 aa13.39□□□□□ -0.27
SHKBP1-202ENST00000593764 VWC2Q2TAL6 325 aa13.39□□□□□ -0.27
SHKBP1-202ENST00000593764 PXDC1Q5TGL8 231 aa13.39□□□□□ -0.27
SHKBP1-202ENST00000593764 ZNF546Q86UE3 836 aa13.39□□□□□ -0.27
SHKBP1-202ENST00000593764 ARV1Q9H2C2 271 aa13.39□□□□□ -0.27
SHKBP1-202ENST00000593764 IGHV4-28A0A0C4DH34 117 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 A0A0J9YX75 114 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 NUPR2A6NF83 97 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 MRPS12O15235 138 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 MIFP14174 115 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 RPL7P18124 248 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 NANOS2P60321 138 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 SPATA31B1PQ5VZV4 182 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 IGFL4Q6B9Z1 124 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 ZNF709Q8N972 641 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 C11orf45Q8TAV5 145 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 C1QTNF4Q9BXJ3 329 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 RPRMQ9NS64 109 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 UQCC1Q9NVA1 299 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 WDR83OSQ9Y284 106 aa13.38□□□□□ -0.27
SHKBP1-202ENST00000593764 S100A11P31949 105 aa13.37□□□□□ -0.27
SHKBP1-202ENST00000593764 CAMLGP49069 296 aa13.37□□□□□ -0.27
SHKBP1-202ENST00000593764 DEFA1P59665 94 aa13.37□□□□□ -0.27
SHKBP1-202ENST00000593764 DEFA3P59666 94 aa13.37□□□□□ -0.27
SHKBP1-202ENST00000593764 FAM78BQ5VT40 261 aa13.37□□□□□ -0.27
SHKBP1-202ENST00000593764 PHLDA1Q8WV24 401 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-202ENST00000593764 TMEM37Q8WXS4 190 aa13.37□□□□□ -0.27
SHKBP1-202ENST00000593764 NMES1Q9C002 83 aa13.37□□□□□ -0.27
SHKBP1-202ENST00000593764 A8MTW9 85 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 H0YIZ8 118 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 H2BFSP57053 126 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 FXYD7P58549 80 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 PRR20EP86478 221 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 PRR20CP86479 221 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 PRR20DP86480 221 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 PRR20BP86481 221 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 PRR20AP86496 221 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 EBLN2Q6P2I7 272 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 LINC00305Q7Z4B0 112 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 S100A7AQ86SG5 101 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 RNF182Q8N6D2 247 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 OR4B1Q8NGF8 309 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 SLC35B3Q9H1N7 401 aa13.36□□□□□ -0.27
SHKBP1-202ENST00000593764 ELOA3CA0A087WX78 387 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 A0A087X0K7 114 aa13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 JTBO76095 146 aa13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 FGL1Q08830 312 aa13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 RAB31Q13636 194 aa13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 MORN5Q5VZ52 161 aa13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 MIC13Q5XKP0 118 aa13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 ZNF705AQ6ZN79 300 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 STX12Q86Y82 276 aa13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 MFFQ9GZY8 342 aa13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 OR5AC2Q9NZP5 309 aa13.35□□□□□ -0.27
SHKBP1-202ENST00000593764 HBG1P69891 147 aa13.34□□□□□ -0.27
SHKBP1-202ENST00000593764 HBG2P69892 147 aa13.34□□□□□ -0.27
SHKBP1-202ENST00000593764 PSG9Q00887 426 aa13.34□□□□□ -0.27
SHKBP1-202ENST00000593764 NHLH2Q02577 135 aa13.34□□□□□ -0.27
SHKBP1-202ENST00000593764 ATP6V1FQ16864 119 aa13.34□□□□□ -0.27
SHKBP1-202ENST00000593764 AMTNQ6UX39 209 aa13.34□□□□□ -0.27
SHKBP1-202ENST00000593764 CHAC2Q8WUX2 184 aa13.34□□□□□ -0.27
SHKBP1-202ENST00000593764 HRH4Q9H3N8 390 aa13.34□□□□□ -0.27
SHKBP1-202ENST00000593764 DNAJC4Q9NNZ3 241 aa13.34□□□□□ -0.27
SHKBP1-202ENST00000593764 UBE2L5PA0A1B0GUS4 154 aa13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 ZNF705FA8MVS1 300 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 COX7A2P2O60397 106 aa13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 RLN2P04090 185 aa13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 ZNF705DP0CH99 300 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 ZNF705BP0CI00 300 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 HLA-DMBP28068 263 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms