RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	LINC00310	P59036	64 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	KRTDAP	P60985	99 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	NUTF2	P61970	127 aa	Known RBP	11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	HBB	P68871	147 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SSBP2	P81877	361 aa	Predicted RBP	11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	MRGPRG-AS1	Q2M3A8	158 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	MORN5	Q5VZ52	161 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	CCDC144NL	Q6NUI1	221 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	BPIFA4P	Q86YQ2	179 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ARL6IP6	Q8N6S5	226 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	LY6G5B	Q8NDX9	201 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	OR4F17	Q8NGA8	305 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	VN1R17P	Q8TDU5	208 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	BLNK	Q8WV28	456 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	NEU4	Q8WWR8	484 aa	Predicted RBP	11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SRSF12	Q8WXF0	261 aa	Known RBP	11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516		Q9H3A6	140 aa		11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	GSX1	Q9H4S2	264 aa	Predicted RBP	11.2	□□□□□ -0.62
NEDD4L-223	ENST00000588516	TEX22	C9J3V5	150 aa		11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	LY6L	H3BQJ8	138 aa		11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SPINK4	O60575	86 aa		11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	HSBP1	O75506	76 aa		11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ZNF672	Q499Z4	452 aa	Predicted RBP	11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ZNF841	Q6ZN19	808 aa		11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	MLST8	Q9BVC4	326 aa		11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	PRSS22	Q9GZN4	317 aa		11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	DPM3	Q9P2X0	92 aa		11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ZFP30	Q9Y2G7	519 aa		11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516	PRRC2A	P48634	2157 aa	Known RBP	11.19	□□□□□ -0.62
NEDD4L-223	ENST00000588516		A0A1B0GUS0	222 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	HIGD1C	A8MV81	97 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	MOS	P00540	346 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	IGLC1	P0CG04	106 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516		Q6AWC8	147 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	PRR27	Q6MZM9	219 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	C1orf122	Q6ZSJ8	110 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	OR11H6	Q8NGC7	330 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	C18orf32	Q8TCD1	76 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	CHCHD1	Q96BP2	118 aa	Known RBP	11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ZNF48	Q96MX3	618 aa	Predicted RBP	11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	NEU1	Q99519	415 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	C7orf69	Q9H7B7	122 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	TPSG1	Q9NRR2	321 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	UQCR10	Q9UDW1	63 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ACAN	P16112	2415 aa		11.18	□□□□□ -0.62
NEDD4L-223	ENST00000588516	IGHV3-72	A0A0B4J1Y9	119 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	TRAV34	A0A0B4J273	112 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516		A0A1B0GXF2	115 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516		I3L2K1	104 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	TCAP	O15273	167 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	NBR2	O15453	112 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	GPR6	P46095	362 aa	Predicted RBP	11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	LYZ	P61626	148 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	NHLRC2	Q8NBF2	726 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	NPB	Q8NG41	125 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	LINC00479	Q96M42	142 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SPOCK3	Q9BQ16	436 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	FAM103A1	Q9BTL3	118 aa	Known RBP	11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	THYN1	Q9P016	225 aa		11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	MRPL36	Q9P0J6	103 aa	Known RBP	11.17	□□□□□ -0.62
NEDD4L-223	ENST00000588516	C19orf71	A6NCJ1	209 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	OR5AL1	P0C617	328 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	PSG1	P11464	419 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	COL8A2	P25067	703 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SLC35B1	P78383	322 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	PDE6H	Q13956	83 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	KIAA1644	Q3SXP7	199 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	KIR3DL3	Q8N743	410 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	TMEM75	Q8N9X5	138 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	RITA1	Q96K30	269 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SHANK2-AS3	Q9BTD1	123 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	WNT10A	Q9GZT5	417 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	FBXL15	Q9H469	300 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	CBLN4	Q9NTU7	201 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ONECUT1	Q9UBC0	465 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	FBXL7	Q9UJT9	491 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ABCA4	P78363	2273 aa		11.16	□□□□□ -0.62
NEDD4L-223	ENST00000588516		M0R2Z0	102 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	CHEK1	O14757	476 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	RPLP1	P05386	114 aa	Known RBP	11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SNRPC	P09234	159 aa	Known RBP	11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	COX7A1	P24310	79 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	ADORA2A-AS1	P86434	159 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	RIG	Q13278	110 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	IGFBPL1	Q8WX77	278 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	FAM168A	Q92567	244 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	MDFI	Q99750	246 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	SNHG12	Q9BXW3	62 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	PAM16	Q9Y3D7	125 aa		11.15	□□□□□ -0.62
NEDD4L-223	ENST00000588516	NPIPB5	A8MRT5	1133 aa		11.14	□□□□□ -0.63
NEDD4L-223	ENST00000588516	NPIPB6	E9PJ23	425 aa		11.14	□□□□□ -0.63
NEDD4L-223	ENST00000588516	NDUFA3	O95167	84 aa		11.14	□□□□□ -0.63
NEDD4L-223	ENST00000588516	PLAU	P00749	431 aa		11.14	□□□□□ -0.63
NEDD4L-223	ENST00000588516	IGHV3-48	P01763	117 aa		11.14	□□□□□ -0.63
NEDD4L-223	ENST00000588516	BTF3	P20290	206 aa	Known RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms