RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 C5orf56Q8N8D9 126 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 ZNF439Q8NDP4 499 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 CT45A3Q8NHU0 189 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 C15orf40Q8WUR7 153 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 PTX4Q96A99 478 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 TMEM56Q96MV1 263 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 HDHD3Q9BSH5 251 aaPredicted RBP3.62□□□□□ -1.83
ZNF540-204ENST00000586792 MARVELD1Q9BSK0 173 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 OR51E2Q9H255 320 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 MAP6D1Q9H9H5 199 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 LYRM2Q9NU23 88 aaPredicted RBP3.62□□□□□ -1.83
ZNF540-204ENST00000586792 WASHC3Q9Y3C0 194 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 ANK2Q01484 3957 aa3.62□□□□□ -1.83
ZNF540-204ENST00000586792 TRBV6-6A0A0A6YYG2 114 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 TINCRA0A1B0GVN0 87 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 SNURFLB1AK76 121 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 MFNGO00587 321 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 PHOX2AO14813 284 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 CDK2AP2O75956 126 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 GAGE7O76087 117 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 APOC3P02656 99 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 CD74P04233 296 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 FCGR3AP08637 254 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 GAGE12FP0CL80 117 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 GAGE12GP0CL81 117 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 GAGE12IP0CL82 117 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 CT45A6P0DMU7 189 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 CT45A5P0DMU8 189 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 CT45A7P0DMV0 189 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 CD37P11049 281 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 RAB5AP20339 215 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 SDC2P34741 201 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 RPL8P62917 257 aaKnown RBP3.61□□□□□ -1.83
ZNF540-204ENST00000586792 GAGE4Q13068 117 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 PEA15Q15121 130 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 RTL8BQ17RB0 113 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 Q5BKY6 102 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 TCTEX1D4Q5JR98 221 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 LAMTOR1Q6IAA8 161 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 ZNF880Q6PDB4 577 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 ZNF833PQ6ZTB9 187 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 SLC16A13Q7RTY0 426 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 ZNF383Q8NA42 475 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 ABHD14BQ96IU4 210 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 LINC00052Q96N35 136 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 VPS25Q9BRG1 176 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 SEC11CQ9BY50 192 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 MRPL20Q9BYC9 149 aaKnown RBP3.61□□□□□ -1.83
ZNF540-204ENST00000586792 OR2D2Q9H210 308 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 ABCG5Q9H222 651 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 IFI27L2Q9H2X8 130 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 MAP1LC3AQ9H492 121 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 PARP11Q9NR21 331 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 COMMD9Q9P000 198 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 OR1A1Q9P1Q5 309 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 LSM5Q9Y4Y9 91 aaKnown RBP3.61□□□□□ -1.83
ZNF540-204ENST00000586792 SMAD5-AS1Q9Y6J3 95 aa3.61□□□□□ -1.83
ZNF540-204ENST00000586792 C7orf66A4D0T2 115 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 SMIM9A6NGZ8 99 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 FOXI3A8MTJ6 420 aaPredicted RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 HMSDA8MTL9 139 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 ZNF736B4DX44 427 aaPredicted RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 M0R1X1 148 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 MRPS12O15235 138 aaKnown RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 CREBL2O60519 120 aaPredicted RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 IGHG2P01859 326 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 SCTP09683 121 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 OR5AL1P0C617 328 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 MYOD1P15172 320 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 LSM3P62310 102 aaKnown RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 TMEM267Q0VDI3 215 aaPredicted RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 FABP9Q0Z7S8 132 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 SRSF9Q13242 221 aaKnown RBP eCLIP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 EBI3Q14213 229 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 TIGITQ495A1 244 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 RPL39P5Q59GN2 51 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 UBE2NLQ5JXB2 153 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 TMEM69Q5SWH9 247 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 FAM53AQ6NSI3 398 aaPredicted RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 PDPNQ86YL7 162 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 MAPKAPK5-AS1Q8N8E1 139 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 KLHL30-AS1Q8NEE0 82 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 BEST4Q8NFU0 473 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 OR13C8Q8NGS7 320 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 EEF1AKMT3Q96AZ1 226 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 S100A16Q96FQ6 103 aaKnown RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 NABP2Q9BQ15 211 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 AGMATQ9BSE5 352 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 PPDPFQ9H3Y8 114 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 FNDC4Q9H6D8 234 aaPredicted RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 PLSCR3Q9NRY6 295 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 ZNF230Q9UIE0 474 aaPredicted RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 LINC00527Q9UJ94 153 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 C14orf166Q9Y224 244 aaKnown RBP3.6□□□□□ -1.83
ZNF540-204ENST00000586792 OR2W1Q9Y3N9 320 aa3.6□□□□□ -1.83
ZNF540-204ENST00000586792 TRBV6-7A0A0A0MS04 114 aa3.59□□□□□ -1.83
ZNF540-204ENST00000586792 TMEM235A6NFC5 223 aa3.59□□□□□ -1.83
ZNF540-204ENST00000586792 PPP5D1E7EU14 171 aa3.59□□□□□ -1.83
ZNF540-204ENST00000586792 H0YJW9 148 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms