RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 Q8N814 137 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 ST6GALNAC3Q8NDV1 305 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 OR5D14Q8NGL3 314 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 OR10K1Q8NGX5 313 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 ZNF418Q8TF45 676 aaPredicted RBP0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 ZNF714Q96N38 554 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 TP53RKQ96S44 253 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 MAP1LC3BQ9GZQ8 125 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 BOLA2Q9H3K6 86 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 POPDC3Q9HBV1 291 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 SS18L2Q9UHA2 77 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 U3KQ87 197 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 TNS3Q68CZ2 1445 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 YTHDC2Q9H6S0 1430 aaKnown RBP0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 POLEQ07864 2286 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 SCN3AQ9NY46 2000 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 CAMSAP2Q08AD1 1489 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 ROS1P08922 2347 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 DOCK4Q8N1I0 1966 aa0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 TLCD2A6NGC4 264 aa0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 TMEM238C9JI98 176 aa0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 PPP5D1E7EU14 171 aa0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 TRGC2P03986 189 aa0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 SMIM20Q8N5G0 67 aa0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 NUP35Q8NFH5 326 aa0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 OR4K15Q8NH41 348 aa0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 NEK7Q8TDX7 302 aa0.85□□□□□ -2.27
PPP4R1-227ENST00000583988 CEP192Q8TEP8 1941 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 TRAV5A0A0B4J249 113 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 M0R2N4 97 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 HIST1H2BKO60814 126 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 HIST1H2BJP06899 126 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 IDO1P14902 403 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 GNG10P50151 68 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 RAB5CP51148 216 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 VBP1P61758 197 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 PRB3Q04118 309 aaPredicted RBP0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 MPV17LQ2QL34 196 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 EXOC3-AS1Q8N2X6 119 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 FAM24BQ8N5W8 94 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 OR5D16Q8NGK9 328 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 BORCS5Q969J3 196 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 PLEKHB2Q96CS7 222 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 MUCL1Q96DR8 90 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 HOPXQ9BPY8 73 aaPredicted RBP0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 RTL8AQ9BWD3 113 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 CDC42SE1Q9NRR8 79 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 UFC1Q9Y3C8 167 aa0.84□□□□□ -2.27
PPP4R1-227ENST00000583988 TECTAO75443 2155 aa0.84□□□□□ -2.28
PPP4R1-227ENST00000583988 MYH2Q9UKX2 1941 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 SYNMO15061 1565 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 NUP98P52948 1817 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 TRAV10A0A0B4J240 114 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 M0R233 179 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 GPR31O00270 319 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 INE1O15225 51 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 LYRM1O43325 122 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 MFSD11O43934 449 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 ERC2-IT1O76042 136 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 CRHP06850 196 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 G0S2P27469 103 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 TMBIM6P55061 237 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 DSCR4P56555 118 aaPredicted RBP0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 CDK6Q00534 326 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 GDF5OSQ5U4N7 250 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 TEN1Q86WV5 123 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 Q8IYB0 196 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 DYDC1Q8WWB3 177 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 GPX7Q96SL4 187 aaPredicted RBP0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 SELENOSQ9BQE4 189 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 CACYBPQ9HB71 228 aaKnown RBP0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 MED11Q9P086 117 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 ORMDL1Q9P0S3 153 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 ATPIF1Q9UII2 106 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 OR52A1Q9UKL2 312 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 ARHGEF11O15085 1522 aa0.83□□□□□ -2.28
PPP4R1-227ENST00000583988 NUP210LQ5VU65 1888 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 CEP164Q9UPV0 1460 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 PEAK1Q9H792 1746 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 A0A1B0GV72 72 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 OR2T8A6NH00 312 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 E7EUB6 86 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 H3BQV1 296 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 CCL16O15467 120 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 CST7O76096 145 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 ARPP19P56211 112 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 ROMO1P60602 79 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 CNBPP62633 177 aaKnown RBP0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 KLRD1Q13241 179 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 RTL8BQ17RB0 113 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 C1orf140Q5VVS0 124 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 PATE1Q8WXA2 126 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 CHCHD1Q96BP2 118 aaKnown RBP0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 ISOC1Q96CN7 298 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 PCBD2Q9H0N5 130 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 CENPHQ9H3R5 247 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 TMEM14CQ9P0S9 112 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 ZFP30Q9Y2G7 519 aa0.82□□□□□ -2.28
PPP4R1-227ENST00000583988 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms