RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SHANK2-AS3Q9BTD1 123 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 PRSS22Q9GZN4 317 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 TMEM242Q9NWH2 141 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 MRPL27Q9P0M9 148 aaKnown RBP7.26□□□□□ -1.25
SS18-220ENST00000582092 TMEM14CQ9P0S9 112 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 LINC00527Q9UJ94 153 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 RPH3ALQ9UNE2 315 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 SOX21Q9Y651 276 aaPredicted RBP7.26□□□□□ -1.25
SS18-220ENST00000582092 TRBV9A0A0B4J1U6 114 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 H3BRN7 92 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 IGHV4-59P01825 116 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 IGF1P05019 195 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 RPL7P18124 248 aaKnown RBP7.25□□□□□ -1.25
SS18-220ENST00000582092 RPL35P42766 123 aaKnown RBP7.25□□□□□ -1.25
SS18-220ENST00000582092 IER3P46695 156 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 CSN1S1P47710 185 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 CRIP2P52943 208 aaPredicted RBP7.25□□□□□ -1.25
SS18-220ENST00000582092 TAS2R60P59551 318 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 SLC35B1P78383 322 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 FAM209BQ5JX69 171 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 MORN5Q5VZ52 161 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 LEMD1Q68G75 181 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 OR8I2Q8N0Y5 310 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 BCL6BQ8N143 479 aaPredicted RBP7.25□□□□□ -1.25
SS18-220ENST00000582092 ZNF502Q8TBZ5 544 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 C11orf52Q96A22 123 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 ISOC2Q96AB3 205 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 FXYD5Q96DB9 178 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 ZNF503Q96F45 646 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 ATP6V0BQ99437 205 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 NPFFR1Q9GZQ6 430 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 AAMDCQ9H7C9 122 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 LY96Q9Y6Y9 160 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 URGCP-MRPS24S4R325 110 aa7.25□□□□□ -1.25
SS18-220ENST00000582092 ZNF98A6NK75 572 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 ZNF785A8K8V0 405 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 TGOLN2O43493 480 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 CTSGP08311 255 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 MGST1P10620 155 aaKnown RBP7.24□□□□□ -1.25
SS18-220ENST00000582092 NPPCP23582 126 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 RPS10P46783 165 aaKnown RBP7.24□□□□□ -1.25
SS18-220ENST00000582092 GALR1P47211 349 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 BLCAPP62952 87 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 PSG9Q00887 426 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 C12orf54Q6X4T0 127 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 Q6YL49 198 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 ZNF329Q86UD4 541 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 OR10G8Q8NGN5 311 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 GPR82Q96P67 336 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 METTL26Q96S19 204 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 Q9H3A6 140 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 BIN3Q9NQY0 253 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 OTORQ9NRC9 128 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 VPREB3Q9UKI3 123 aa7.24□□□□□ -1.25
SS18-220ENST00000582092 COLCA2A8K830 154 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 C9JCJ5 164 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 HAX1O00165 279 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 PEX7O00628 323 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 FSHBP01225 129 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 AMY1AP04745 511 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 S100A6P06703 90 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 SNRPCP09234 159 aaKnown RBP7.23□□□□□ -1.25
SS18-220ENST00000582092 GP9P14770 177 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 RAB5AP20339 215 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 ARL3P36405 182 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 ERVFC1-1P60608 527 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 KLK9Q2XQG4 91 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 C9orf139Q6ZV77 190 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 LYPD1Q8N2G4 141 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 C5orf17Q8NAS9 161 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 OCC1Q8TAD7 63 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 SFRP2Q96HF1 295 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 GRAMD2BQ96HH9 432 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 CHRDL1Q9BU40 450 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 DERL1Q9BUN8 251 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 ELOVL1Q9BW60 279 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 AURKAIP1Q9NWT8 199 aaPredicted RBP7.23□□□□□ -1.25
SS18-220ENST00000582092 KLK9Q9UKQ9 250 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 EPDR1Q9UM22 224 aa7.23□□□□□ -1.25
SS18-220ENST00000582092 IGHV3-35A0A0C4DH35 117 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 GGTLC3B5MD39 225 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 H3BTX0 84 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 SRSF2Q01130 221 aaKnown RBP7.22□□□□□ -1.25
SS18-220ENST00000582092 CENPWQ5EE01 88 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 TOMM20LQ6UXN7 152 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 LINC01551Q86U37 167 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 BAGE2Q86Y30 109 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 SIGLECL1Q8N7X8 197 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 DAZAP1Q96EP5 407 aaKnown RBP7.22□□□□□ -1.25
SS18-220ENST00000582092 FMC1Q96HJ9 113 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 FAM210BQ96KR6 192 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 NOL4LQ96MY1 436 aaPredicted RBP7.22□□□□□ -1.25
SS18-220ENST00000582092 ATG101Q9BSB4 218 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 SERTAD4Q9NUC0 356 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 MXRA5Q9NR99 2828 aa7.22□□□□□ -1.25
SS18-220ENST00000582092 TMEM89A2RUT3 159 aa7.21□□□□□ -1.26
SS18-220ENST00000582092 HOXA3O43365 443 aaPredicted RBP7.21□□□□□ -1.26
SS18-220ENST00000582092 BRI3O95415 125 aa7.21□□□□□ -1.26
SS18-220ENST00000582092 CRYBA1P05813 215 aa7.21□□□□□ -1.26
SS18-220ENST00000582092 FLI1Q01543 452 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms