RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 A0A0U1RQV5 110 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 A0A1B0GW64 132 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 USP17L23D6RBM5 183 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 PRB1P04280 392 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 PRCDQ00LT1 54 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 DAZAP2Q15038 168 aaPredicted RBP3.55□□□□□ -1.84
RTTN-206ENST00000581161 DRAM1Q8N682 238 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 B9D2Q9BPU9 175 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 DDA1Q9BW61 102 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 ATMQ13315 3056 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 HRNRQ86YZ3 2850 aaPredicted RBP3.55□□□□□ -1.84
RTTN-206ENST00000581161 DMXL2Q8TDJ6 3036 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 IGKV1-12A0A0C4DH73 117 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 B9A039 149 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 RPL36A-HNRNPH2H7BZ11 118 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 ETV2O00321 342 aaPredicted RBP3.55□□□□□ -1.84
RTTN-206ENST00000581161 TAX1BP3O14907 124 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 IGKV1D-12P01611 117 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 PLA2G1BP04054 148 aaKnown RBP3.55□□□□□ -1.84
RTTN-206ENST00000581161 IGKV4-1P06312 121 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 RPL35AP18077 110 aaKnown RBP3.55□□□□□ -1.84
RTTN-206ENST00000581161 LAGE3Q14657 143 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 FAM90A2PQ658T7 463 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 ZNF488Q96MN9 340 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 SPXQ9BT56 116 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 GNB1LQ9BYB4 327 aa3.55□□□□□ -1.84
RTTN-206ENST00000581161 NPIPB13A6NJU9 1138 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 OVOL1O14753 267 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 IGHG2P01859 326 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 IGHG4P01861 327 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 PRB2P02812 416 aaPredicted RBP3.54□□□□□ -1.84
RTTN-206ENST00000581161 C3AR1Q16581 482 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 CD300EQ496F6 205 aaPredicted RBP3.54□□□□□ -1.84
RTTN-206ENST00000581161 RIPPLY2Q5TAB7 128 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 WDR82Q6UXN9 313 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 ZNF501Q96CX3 271 aaPredicted RBP3.54□□□□□ -1.84
RTTN-206ENST00000581161 RASL10BQ96S79 203 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 PCDH15Q96QU1 1955 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 CEP290O15078 2479 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 TRGV1A0A0A0MS02 117 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 J3QT63 122 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 CD55P08174 381 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 RHOGP84095 191 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 ZNF585BQ52M93 769 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 LINC01551Q86U37 167 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 C1orf210Q8IVY1 113 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 ASCL2Q99929 193 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 REPIN1Q9BWE0 567 aaKnown RBP3.54□□□□□ -1.84
RTTN-206ENST00000581161 FOXA2Q9Y261 457 aaPredicted RBP3.54□□□□□ -1.84
RTTN-206ENST00000581161 IGKV1D-13A0A0B4J2D9 117 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 VCYO14598 125 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 IGKV1-13P0DP09 117 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 Q6ZSR3 168 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 C10orf35Q96D05 121 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 RPP21Q9H633 154 aaKnown RBP3.54□□□□□ -1.84
RTTN-206ENST00000581161 SCRT2Q9NQ03 307 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 FBXL7Q9UJT9 491 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 IGHV1OR15-9A0A0B4J2B8 117 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 GATA4P43694 442 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 LINC01559Q495D7 138 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 LCN12Q6JVE5 192 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 LINC00305Q7Z4B0 112 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 PPP1R32Q7Z5V6 425 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 H1FOOQ8IZA3 346 aaPredicted RBP3.54□□□□□ -1.84
RTTN-206ENST00000581161 OR51G1Q8NGK1 321 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 MYO9BQ13459 2157 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 CENPVL3A0A0U1RRI6 287 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 C2CD4DB7Z1M9 353 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 LMO7DNF2Z398 122 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 PGLYRP1O75594 196 aaPredicted RBP3.54□□□□□ -1.84
RTTN-206ENST00000581161 SLC25A16P16260 332 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 HCP5Q6MZN7 132 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 CT55Q8WUE5 264 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 FMC1Q96HJ9 113 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 SF3B5Q9BWJ5 86 aaKnown RBP3.54□□□□□ -1.84
RTTN-206ENST00000581161 UBE2D4Q9Y2X8 147 aa3.54□□□□□ -1.84
RTTN-206ENST00000581161 YPEL1O60688 119 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 TIAF1O95411 115 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 CLDN14O95500 239 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 CCL3P10147 92 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 PRR20EP86478 221 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 PRR20CP86479 221 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 PRR20DP86480 221 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 PRR20BP86481 221 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 PRR20AP86496 221 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 PSG7Q13046 419 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 GAGE13Q4V321 117 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 SCRT1Q9BWW7 348 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 TM2D2Q9BX73 214 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 SRXN1Q9BYN0 137 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 DNAJC4Q9NNZ3 241 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 RPUSD1Q9UJJ7 312 aaKnown RBP3.53□□□□□ -1.84
RTTN-206ENST00000581161 A0A0U1RRA0 63 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 CDKN1AP38936 164 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 PSG4Q00888 419 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 C9orf47Q6ZRZ4 202 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 C17orf82Q86X59 251 aaPredicted RBP3.53□□□□□ -1.84
RTTN-206ENST00000581161 FER1L6-AS1Q8NA97 138 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 NABP1Q96AH0 204 aa3.53□□□□□ -1.84
RTTN-206ENST00000581161 CCL13Q99616 98 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms