RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NHLRC4P0CG21 123 aaPredicted RBP7.48□□□□□ -1.21
GGA3-209ENST00000580646 HAGHQ16775 308 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 VWC2Q2TAL6 325 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 TIGITQ495A1 244 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 LRRC37A5PQ49AS3 106 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 TOMM20LQ6UXN7 152 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 ADAMTSL5Q6ZMM2 481 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 HAPLN4Q86UW8 402 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 Q8WTZ3 238 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 NDUFAF3Q9BU61 184 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 RNF126Q9BV68 326 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 OR5AC2Q9NZP5 309 aa7.48□□□□□ -1.21
GGA3-209ENST00000580646 PUS1Q9Y606 427 aaKnown RBP eCLIP7.48□□□□□ -1.21
GGA3-209ENST00000580646 TRAV14DV4A0A0A6YYC5 116 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 TRAV25A0A0B4J276 109 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 IGHV3-35A0A0C4DH35 117 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 IGSF23A1L1A6 192 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 ARPC5O15511 151 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 CD5P06127 495 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 RD3LP0DJH9 198 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 HOXA5P20719 270 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 BMI1P35226 326 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 PPT1P50897 306 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 SELENOTP62341 195 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 AKR1C1Q04828 323 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 SLC38A11Q08AI6 406 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 ARL16Q0P5N6 197 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 OR2F1Q13607 317 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 TM4SF20Q53R12 229 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 LCN12Q6JVE5 192 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 TEPPQ6URK8 271 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 SMIM15Q7Z3B0 74 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 OR51G1Q8NGK1 321 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 WDR89Q96FK6 387 aaPredicted RBP7.47□□□□□ -1.21
GGA3-209ENST00000580646 MFFQ9GZY8 342 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 SMAD5-AS1Q9Y6J3 95 aa7.47□□□□□ -1.21
GGA3-209ENST00000580646 FXYD6-FXYD2A0A087WZ82 144 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 IGHV7-4-1A0A0J9YVY3 117 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 A0A1W2PPQ1 181 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 A0A1W2PS18 150 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 BCL2L11O43521 198 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 MPDU1O75352 247 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 CST7O76096 145 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 YIF1AO95070 293 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 PSG1P11464 419 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 GP9P14770 177 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 FGF7P21781 194 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 CRYBB3P26998 211 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 EWSR1Q01844 656 aaKnown RBP eCLIP7.46□□□□□ -1.22
GGA3-209ENST00000580646 DEFB114Q30KQ6 69 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 DYNLRB2Q8TF09 96 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 HIST1H2BAQ96A08 127 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 METTL26Q96S19 204 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 ASCL2Q99929 193 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 C20orf24Q9BUV8 137 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 TMEM147Q9BVK8 224 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 TMEM231Q9H6L2 316 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 VSIRQ9H7M9 311 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 UQCC1Q9NVA1 299 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 SMPXQ9UHP9 88 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 SLC45A2Q9UMX9 530 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 SACSQ9NZJ4 4579 aa7.46□□□□□ -1.22
GGA3-209ENST00000580646 SMCO3A2RU48 225 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 DLEU1O43261 78 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 IL4P05112 153 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 RAB5AP20339 215 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 NPPCP23582 126 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 S100A7P31151 101 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 PLP1P60201 277 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 ZNF90Q03938 601 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 ZNF546Q86UE3 836 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 KCNRGQ8N5I3 272 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 TMEM217Q8N7C4 229 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 HSD17B11Q8NBQ5 300 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 RNF125Q96EQ8 232 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 WDR83OSQ9Y284 106 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 U3KQE9 123 aa7.45□□□□□ -1.22
GGA3-209ENST00000580646 COL7A1Q02388 2944 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 CHEK1O14757 476 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 EDN2P20800 178 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 RPL12P30050 165 aaKnown RBP7.44□□□□□ -1.22
GGA3-209ENST00000580646 RAB31Q13636 194 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 CD300EQ496F6 205 aaPredicted RBP7.44□□□□□ -1.22
GGA3-209ENST00000580646 CFAP161Q6P656 301 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 BTNL8Q6UX41 500 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 CYP2G1PQ6ZSU1 146 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 OR5C1Q8NGR4 320 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 GRAMD2BQ96HH9 432 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 WWC2-AS2Q96NR7 200 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 AQP10Q96PS8 301 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 RHPN1-AS1Q9BWJ2 59 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 TREM1Q9NP99 234 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 RABAC1Q9UI14 185 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 U3KQK5 164 aa7.44□□□□□ -1.22
GGA3-209ENST00000580646 IGHV3OR16-8A0A075B7F1 116 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 M0R143 59 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 AGPAT2O15120 278 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 BUB3O43684 328 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 DFFBO76075 338 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 G0S2P27469 103 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms