RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TMEM262E9PQX1 116 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 WDR86Q86TI4 376 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 ZCCHC24Q8N2G6 241 aaKnown RBP10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 KIR3DL3Q8N743 410 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 ZNF492Q9P255 531 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 ZNF815PA8K554 130 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 PRB3Q04118 309 aaPredicted RBP10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 Q86TA4 180 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 NCOR1P1Q9H4R4 102 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 FRMPD3Q5JV73 1810 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 ADIPOQQ15848 244 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 A8MWV9 139 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 H0YJW9 148 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGHV1-46P01743 117 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 ASIPP42127 132 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 TMEM190Q8WZ59 177 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 FOXC1Q12948 553 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 YPEL4Q96NS1 127 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 CHAC1Q9BUX1 264 aa10.67□□□□□ -0.7
PCDHGB3-201ENST00000576222 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 PAPPA-AS1Q5QFB9 102 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 ASPHD1Q5U4P2 390 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 JMJD8Q96S16 334 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGKV2-40A0A087WW87 121 aaPredicted RBP10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 ZNF503-AS2A6NEH8 195 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGKV2D-40P01614 121 aaPredicted RBP10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 PRR20EP86478 221 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 PRR20CP86479 221 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 PRR20DP86480 221 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 PRR20BP86481 221 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 PRR20AP86496 221 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 EBLN2Q6P2I7 272 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 ARPC1AQ92747 370 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 YLPM1P49750 1951 aaKnown RBP10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 NPIPB6E9PJ23 425 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 ORMDL2Q53FV1 153 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 EEF1AKMT3Q96AZ1 226 aa10.66□□□□□ -0.7
PCDHGB3-201ENST00000576222 SMKR1H3BMG3 65 aa10.65□□□□□ -0.7
PCDHGB3-201ENST00000576222 K7EP34 96 aa10.65□□□□□ -0.7
PCDHGB3-201ENST00000576222 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.7
PCDHGB3-201ENST00000576222 NBR2O15453 112 aa10.65□□□□□ -0.7
PCDHGB3-201ENST00000576222 ZNF56Q15929 161 aa10.65□□□□□ -0.7
PCDHGB3-201ENST00000576222 DEFB125Q8N687 156 aa10.65□□□□□ -0.7
PCDHGB3-201ENST00000576222 FAM168AQ92567 244 aa10.65□□□□□ -0.7
PCDHGB3-201ENST00000576222 ZNF106Q9H2Y7 1883 aaKnown RBP10.65□□□□□ -0.71
PCDHGB3-201ENST00000576222 ATP5G2Q06055 141 aa10.65□□□□□ -0.71
PCDHGB3-201ENST00000576222 LAGE3Q14657 143 aa10.65□□□□□ -0.71
PCDHGB3-201ENST00000576222 CREBBPQ92793 2442 aa10.64□□□□□ -0.71
PCDHGB3-201ENST00000576222 B9A039 149 aa10.64□□□□□ -0.71
PCDHGB3-201ENST00000576222 SH2D1AO60880 128 aa10.64□□□□□ -0.71
PCDHGB3-201ENST00000576222 WNT2P09544 360 aa10.64□□□□□ -0.71
PCDHGB3-201ENST00000576222 CFHR2P36980 270 aa10.64□□□□□ -0.71
PCDHGB3-201ENST00000576222 THADAQ6YHU6 1953 aa10.64□□□□□ -0.71
PCDHGB3-201ENST00000576222 PF4V1P10720 104 aa10.64□□□□□ -0.71
PCDHGB3-201ENST00000576222 BSPH1Q075Z2 132 aa10.64□□□□□ -0.71
PCDHGB3-201ENST00000576222 SLC50A1Q9BRV3 221 aa10.64□□□□□ -0.71
PCDHGB3-201ENST00000576222 SP9P0CG40 484 aa10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 CIRBPQ14011 172 aaKnown RBP10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 TMEM158Q8WZ71 300 aa10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 TMPRSS3P57727 454 aa10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 TMEM200BQ69YZ2 307 aa10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 FGF23Q9GZV9 251 aaPredicted RBP10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 WIPF2Q8TF74 440 aaPredicted RBP10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 TSPAN13O95857 204 aa10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 IGKV3-15P01624 115 aa10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 KLF5Q13887 457 aaPredicted RBP10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 CD300EQ496F6 205 aaPredicted RBP10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 DLX4Q92988 240 aaPredicted RBP10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 TSSC4Q9Y5U2 329 aaPredicted RBP10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 COL4A4P53420 1690 aaPredicted RBP10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 TICRRQ7Z2Z1 1910 aa10.63□□□□□ -0.71
PCDHGB3-201ENST00000576222 APOBEC3AP31941 199 aaPredicted RBP10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 ETDBQ3ZM63 59 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 UBTD1Q9HAC8 227 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 PLSCR4Q9NRQ2 329 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 NBASA2RRP1 2371 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 C15orf65H3BRN8 121 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 GAGE2BQ13066 116 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 GAGE2EQ4V326 116 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 ZFAND6Q6FIF0 208 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 C10orf126Q8N4M7 172 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 GAFA1Q96PS6 74 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 NDUFA4L2Q9NRX3 87 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 GAGE2DQ9UEU5 116 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 TMEM213A2RRL7 107 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 ZNF883P0CG24 379 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 PRSS57Q6UWY2 283 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 Q8TAT8 98 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 GEMIN7Q9H840 131 aaKnown RBP10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 ZNRD1Q9P1U0 126 aa10.62□□□□□ -0.71
PCDHGB3-201ENST00000576222 A0A1W2PPI3 338 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 LGALS9BQ3B8N2 356 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 LGALS9CQ6DKI2 356 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 RNF138Q8WVD3 245 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 TNFRSF14Q92956 283 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 HAX1O00165 279 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 SPINK8P0C7L1 97 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 PLNP26678 52 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms