RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CD81P60033 236 aa10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 DEFA6Q01524 100 aa10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 CD300CQ08708 224 aa10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 TMUB2Q71RG4 321 aa10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 GNPNAT1Q96EK6 184 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 GPR82Q96P67 336 aa10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 SLC25A32Q9H2D1 315 aa10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 MS4A6AQ9H2W1 248 aa10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 BCL2L11O43521 198 aa10.89□□□□□ -0.67
NPLOC4-209ENST00000572760 ATF4P18848 351 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-209ENST00000572760 ACOT6Q3I5F7 207 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-209ENST00000572760 FAM78BQ5VT40 261 aa10.89□□□□□ -0.67
NPLOC4-209ENST00000572760 PSMG3Q9BT73 122 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-209ENST00000572760 ZNF471Q9BX82 626 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-209ENST00000572760 CMC4P56277 68 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-209ENST00000572760 EIF5AP63241 154 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-209ENST00000572760 DEFB121Q5J5C9 76 aa10.88□□□□□ -0.67
NPLOC4-209ENST00000572760 GCSAMLQ5JQS6 135 aa10.88□□□□□ -0.67
NPLOC4-209ENST00000572760 NRN1Q9NPD7 142 aa10.88□□□□□ -0.67
NPLOC4-209ENST00000572760 RFNGQ9Y644 331 aa10.88□□□□□ -0.67
NPLOC4-209ENST00000572760 NBEAL1Q6ZS30 2694 aa10.88□□□□□ -0.67
NPLOC4-209ENST00000572760 TRAV2A0A0B4J234 112 aa10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 A0A1W2PPV4 95 aa10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 CD7P09564 240 aa10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 C4BPBP20851 252 aa10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 RHOBP62745 196 aa10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 LGALSLQ3ZCW2 172 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 BPIFA4PQ86YQ2 179 aa10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 OR2G3Q8NGZ4 309 aa10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 MRPL32Q9BYC8 188 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 CYTL1Q9NRR1 136 aa10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 UBQLN2Q9UHD9 624 aa10.87□□□□□ -0.67
NPLOC4-209ENST00000572760 TRAV5A0A0B4J249 113 aa10.86□□□□□ -0.67
NPLOC4-209ENST00000572760 MBP02144 154 aa10.86□□□□□ -0.67
NPLOC4-209ENST00000572760 M6PRP20645 277 aa10.86□□□□□ -0.67
NPLOC4-209ENST00000572760 MEOX2P50222 304 aa10.86□□□□□ -0.67
NPLOC4-209ENST00000572760 SERF2P84101 59 aa10.86□□□□□ -0.67
NPLOC4-209ENST00000572760 LRRC20Q8TCA0 184 aa10.86□□□□□ -0.67
NPLOC4-209ENST00000572760 MRAPQ8TCY5 172 aa10.86□□□□□ -0.67
NPLOC4-209ENST00000572760 SH3BGRL3Q9H299 93 aa10.86□□□□□ -0.67
NPLOC4-209ENST00000572760 FUT9Q9Y231 359 aa10.86□□□□□ -0.67
NPLOC4-209ENST00000572760 AGRNO00468 2067 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 OR11H12B2RN74 326 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 K7EIL1 84 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 K7EQG2 157 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 ID1P41134 155 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 RAB2AP61019 212 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 SAMD13Q5VXD3 122 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 MORN5Q5VZ52 161 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 FAM122CQ6P4D5 195 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 MIR17HGQ75NE6 70 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 OR10G4Q8NGN3 311 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 OR10G9Q8NGN4 311 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 OR10G7Q8NGN6 311 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 TUBA4BQ9H853 241 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 SEPSECSQ9HD40 501 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 SMAD5-AS1Q9Y6J3 95 aa10.85□□□□□ -0.67
NPLOC4-209ENST00000572760 ZNF688P0C7X2 276 aa10.84□□□□□ -0.67
NPLOC4-209ENST00000572760 TPT1P13693 172 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-209ENST00000572760 TAS2R45P59539 299 aa10.84□□□□□ -0.67
NPLOC4-209ENST00000572760 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-209ENST00000572760 AKR1C8PQ5T2L2 129 aa10.84□□□□□ -0.67
NPLOC4-209ENST00000572760 SPATA31B1PQ5VZV4 182 aa10.84□□□□□ -0.67
NPLOC4-209ENST00000572760 Q8N1Y9 231 aa10.84□□□□□ -0.67
NPLOC4-209ENST00000572760 DCANP1Q8TF63 244 aa10.84□□□□□ -0.67
NPLOC4-209ENST00000572760 DEFB131AP59861 70 aa10.83□□□□□ -0.68
NPLOC4-209ENST00000572760 TMEM41BQ5BJD5 291 aa10.83□□□□□ -0.68
NPLOC4-209ENST00000572760 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.83□□□□□ -0.68
NPLOC4-209ENST00000572760 BAP18Q8IXM2 172 aa10.83□□□□□ -0.68
NPLOC4-209ENST00000572760 LINC00052Q96N35 136 aa10.83□□□□□ -0.68
NPLOC4-209ENST00000572760 MAP6D1Q9H9H5 199 aa10.83□□□□□ -0.68
NPLOC4-209ENST00000572760 OR7C2O60412 319 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 SNRPCP09234 159 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 SPP1P10451 314 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 CDC34P49427 236 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 NKX2-5P52952 324 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 ODF3L2Q3SX64 289 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 KHDC3LQ587J8 217 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 PSMG4Q5JS54 123 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 C9orf62Q8N4C0 152 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 FAM24BQ8N5W8 94 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 DEFB125Q8N687 156 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 PAXXQ9BUH6 204 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 SLC25A2Q9BXI2 301 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 ACTR3CQ9C0K3 210 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 WFDC10AQ9H1F0 79 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 OR51M1Q9H341 326 aa10.82□□□□□ -0.68
NPLOC4-209ENST00000572760 A0A087X0K7 114 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 ISLRO14498 428 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 MRPS12O15235 138 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 PYYP10082 97 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 HIST1H1EP10412 219 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 PSMB3P49720 205 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 EIF5AL1Q6IS14 154 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 LCN15Q6UWW0 184 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 SLC51BQ86UW2 128 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 APRG1Q8IVJ8 170 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 FAM110AQ9BQ89 295 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms