RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 PVRIGQ6DKI7 326 aa13.39□□□□□ -0.27
LITAF-209ENST00000571688 OR4C13Q8NGP0 309 aa13.39□□□□□ -0.27
LITAF-209ENST00000571688 ZNF414Q96IQ9 312 aa13.39□□□□□ -0.27
LITAF-209ENST00000571688 SIGMAR1Q99720 223 aa13.39□□□□□ -0.27
LITAF-209ENST00000571688 D6R8Y8 96 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 SPRY3O43610 288 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 IGLV2-23P01705 113 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 Q6AWC8 147 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 FAM216BQ8N7L0 139 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 CCL13Q99616 98 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 GTSF1LQ9H1H1 148 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 HBDP02042 147 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 FCGR2BP31994 310 aaPredicted RBP13.38□□□□□ -0.27
LITAF-209ENST00000571688 ZNF788Q6ZQV5 615 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 EXOC3-AS1Q8N2X6 119 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 RNF7Q9UBF6 113 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 SIT1Q9Y3P8 196 aa13.38□□□□□ -0.27
LITAF-209ENST00000571688 NKX2-8O15522 239 aa13.37□□□□□ -0.27
LITAF-209ENST00000571688 BMI1P35226 326 aa13.37□□□□□ -0.27
LITAF-209ENST00000571688 TMEM14CQ9P0S9 112 aa13.37□□□□□ -0.27
LITAF-209ENST00000571688 CT45A10P0DMU9 189 aa13.37□□□□□ -0.27
LITAF-209ENST00000571688 GATA4P43694 442 aa13.37□□□□□ -0.27
LITAF-209ENST00000571688 PEAR1Q5VY43 1037 aaPredicted RBP13.37□□□□□ -0.27
LITAF-209ENST00000571688 DEFB108BQ8NET1 73 aa13.37□□□□□ -0.27
LITAF-209ENST00000571688 MAFAQ8NHW3 353 aaPredicted RBP13.37□□□□□ -0.27
LITAF-209ENST00000571688 PIFOQ8TCI5 191 aa13.37□□□□□ -0.27
LITAF-209ENST00000571688 IFI27L1Q96BM0 104 aa13.37□□□□□ -0.27
LITAF-209ENST00000571688 PRELID3AQ96N28 172 aa13.37□□□□□ -0.27
LITAF-209ENST00000571688 F11RQ9Y624 299 aaKnown RBP13.37□□□□□ -0.27
LITAF-209ENST00000571688 FXYD2P54710 66 aa13.36□□□□□ -0.27
LITAF-209ENST00000571688 TMEM75Q8N9X5 138 aa13.36□□□□□ -0.27
LITAF-209ENST00000571688 C9orf106Q8NAJ2 232 aa13.36□□□□□ -0.27
LITAF-209ENST00000571688 HIGD1AQ9Y241 93 aa13.36□□□□□ -0.27
LITAF-209ENST00000571688 FTH1P19P0C7X4 201 aa13.36□□□□□ -0.27
LITAF-209ENST00000571688 TM4SF20Q53R12 229 aa13.36□□□□□ -0.27
LITAF-209ENST00000571688 VGLL1Q99990 258 aa13.36□□□□□ -0.27
LITAF-209ENST00000571688 HIGD1BQ9P298 99 aa13.36□□□□□ -0.27
LITAF-209ENST00000571688 LINC00312Q9Y6C7 94 aa13.36□□□□□ -0.27
LITAF-209ENST00000571688 FXYD7P58549 80 aa13.35□□□□□ -0.27
LITAF-209ENST00000571688 SMAGPQ0VAQ4 97 aa13.35□□□□□ -0.27
LITAF-209ENST00000571688 FAM104BQ5XKR9 115 aa13.35□□□□□ -0.27
LITAF-209ENST00000571688 C18orf15Q96N68 181 aa13.35□□□□□ -0.27
LITAF-209ENST00000571688 URB1O60287 2271 aaKnown RBP13.35□□□□□ -0.27
LITAF-209ENST00000571688 CRIP1P50238 77 aa13.35□□□□□ -0.27
LITAF-209ENST00000571688 MRGPRG-AS1Q2M3A8 158 aa13.35□□□□□ -0.27
LITAF-209ENST00000571688 HCP5Q6MZN7 132 aa13.35□□□□□ -0.27
LITAF-209ENST00000571688 PHLDA1Q8WV24 401 aaPredicted RBP13.35□□□□□ -0.27
LITAF-209ENST00000571688 TPSG1Q9NRR2 321 aa13.35□□□□□ -0.27
LITAF-209ENST00000571688 CD300EQ496F6 205 aaPredicted RBP13.34□□□□□ -0.27
LITAF-209ENST00000571688 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 ORMDL3Q8N138 153 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 BCL6BQ8N143 479 aaPredicted RBP13.34□□□□□ -0.27
LITAF-209ENST00000571688 FAM169BQ8N8A8 192 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 ZNF71Q9NQZ8 489 aaPredicted RBP13.34□□□□□ -0.27
LITAF-209ENST00000571688 SLC25A15Q9Y619 301 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 CACNA1GO43497 2377 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 PLXNB1O43157 2135 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 A0A1B0GV72 72 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 GCSHP23434 173 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 TPPP3Q9BW30 176 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 DKK2Q9UBU2 259 aa13.34□□□□□ -0.27
LITAF-209ENST00000571688 TSSC4Q9Y5U2 329 aaPredicted RBP13.34□□□□□ -0.27
LITAF-209ENST00000571688 SERTM2A0A1B0GWG4 89 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 NDUFS7O75251 213 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 TNFRSF1AP19438 455 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 DIAPH2-AS1Q14236 149 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 DHRS13Q6UX07 377 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 AMN1Q8IY45 258 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 TMEM178AQ8NBL3 297 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 ASCL2Q99929 193 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 PLSCR4Q9NRQ2 329 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 A0A1W2PNU3 283 aaPredicted RBP13.33□□□□□ -0.28
LITAF-209ENST00000571688 GAGE12HA6NDE8 117 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 SLC25A17O43808 307 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 IGHG3P01860 377 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 TMEM190Q8WZ59 177 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 SLC25A39Q9BZJ4 359 aaPredicted RBP13.33□□□□□ -0.28
LITAF-209ENST00000571688 PSG8Q9UQ74 426 aa13.33□□□□□ -0.28
LITAF-209ENST00000571688 IGHV3-21A0A0B4J1V1 117 aa13.32□□□□□ -0.28
LITAF-209ENST00000571688 TMEM213A2RRL7 107 aa13.32□□□□□ -0.28
LITAF-209ENST00000571688 FER1L6-AS2Q96M78 137 aa13.32□□□□□ -0.28
LITAF-209ENST00000571688 CLUHP3Q96NS8 147 aa13.32□□□□□ -0.28
LITAF-209ENST00000571688 ATP6V0BQ99437 205 aa13.32□□□□□ -0.28
LITAF-209ENST00000571688 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
LITAF-209ENST00000571688 VMA21Q3ZAQ7 101 aa13.32□□□□□ -0.28
LITAF-209ENST00000571688 MRPL51Q4U2R6 128 aaKnown RBP13.32□□□□□ -0.28
LITAF-209ENST00000571688 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
LITAF-209ENST00000571688 SPANXB1Q9NS25 103 aaPredicted RBP13.32□□□□□ -0.28
LITAF-209ENST00000571688 IGLV3-9A0A075B6K5 115 aa13.31□□□□□ -0.28
LITAF-209ENST00000571688 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
LITAF-209ENST00000571688 LYZP61626 148 aa13.31□□□□□ -0.28
LITAF-209ENST00000571688 PSMG4Q5JS54 123 aa13.31□□□□□ -0.28
LITAF-209ENST00000571688 LYZL1Q6UWQ5 148 aa13.31□□□□□ -0.28
LITAF-209ENST00000571688 INTS1Q8N201 2190 aaKnown RBP13.31□□□□□ -0.28
LITAF-209ENST00000571688 IGKV2D-26A0A0A0MRZ7 120 aa13.31□□□□□ -0.28
LITAF-209ENST00000571688 K7ERJ3 54 aa13.31□□□□□ -0.28
LITAF-209ENST00000571688 GLRXP35754 106 aa13.31□□□□□ -0.28
LITAF-209ENST00000571688 CHAC1Q9BUX1 264 aa13.31□□□□□ -0.28
LITAF-209ENST00000571688 DSPP15924 2871 aaKnown RBP13.31□□□□□ -0.28
LITAF-209ENST00000571688 CADP27708 2225 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms