RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 LINC00052Q96N35 136 aa13.43□□□□□ -0.26
LINC01238-205ENST00000567549 TRGV9Q99603 122 aa13.43□□□□□ -0.26
LINC01238-205ENST00000567549 SLC45A2Q9UMX9 530 aa13.43□□□□□ -0.26
LINC01238-205ENST00000567549 RFNGQ9Y644 331 aa13.43□□□□□ -0.26
LINC01238-205ENST00000567549 HMSDA8MTL9 139 aa13.42□□□□□ -0.26
LINC01238-205ENST00000567549 CCSO14618 274 aa13.42□□□□□ -0.26
LINC01238-205ENST00000567549 ADAP1O75689 374 aa13.42□□□□□ -0.26
LINC01238-205ENST00000567549 GALR1P47211 349 aa13.42□□□□□ -0.26
LINC01238-205ENST00000567549 NKX2-5P52952 324 aaPredicted RBP13.42□□□□□ -0.26
LINC01238-205ENST00000567549 GPR82Q96P67 336 aa13.42□□□□□ -0.26
LINC01238-205ENST00000567549 SAV1Q9H4B6 383 aaPredicted RBP13.42□□□□□ -0.26
LINC01238-205ENST00000567549 RPRMQ9NS64 109 aa13.42□□□□□ -0.26
LINC01238-205ENST00000567549 PAIP2BQ9ULR5 123 aaKnown RBP13.42□□□□□ -0.26
LINC01238-205ENST00000567549 GOLT1BQ9Y3E0 138 aa13.42□□□□□ -0.26
LINC01238-205ENST00000567549 ZNF705AQ6ZN79 300 aaPredicted RBP13.41□□□□□ -0.26
LINC01238-205ENST00000567549 PRR13Q9NZ81 148 aa13.41□□□□□ -0.26
LINC01238-205ENST00000567549 ZNF705FA8MVS1 300 aaPredicted RBP13.4□□□□□ -0.26
LINC01238-205ENST00000567549 ZNF705DP0CH99 300 aaPredicted RBP13.4□□□□□ -0.26
LINC01238-205ENST00000567549 ZNF705BP0CI00 300 aaPredicted RBP13.4□□□□□ -0.26
LINC01238-205ENST00000567549 PRR20EP86478 221 aa13.4□□□□□ -0.26
LINC01238-205ENST00000567549 PRR20CP86479 221 aa13.4□□□□□ -0.26
LINC01238-205ENST00000567549 PRR20DP86480 221 aa13.4□□□□□ -0.26
LINC01238-205ENST00000567549 PRR20BP86481 221 aa13.4□□□□□ -0.26
LINC01238-205ENST00000567549 PRR20AP86496 221 aa13.4□□□□□ -0.26
LINC01238-205ENST00000567549 BPIFCQ8NFQ6 507 aa13.4□□□□□ -0.26
LINC01238-205ENST00000567549 OR4B1Q8NGF8 309 aa13.4□□□□□ -0.26
LINC01238-205ENST00000567549 THAP6Q8TBB0 222 aa13.4□□□□□ -0.26
LINC01238-205ENST00000567549 RNF24Q9Y225 148 aa13.4□□□□□ -0.26
LINC01238-205ENST00000567549 KMT2AQ03164 3969 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 G3V3Q6 166 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 HBE1P02100 147 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 PET100P0DJ07 73 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 PSG9Q00887 426 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 ZNF90Q03938 601 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 IAH1Q2TAA2 248 aaPredicted RBP13.39□□□□□ -0.27
LINC01238-205ENST00000567549 C12orf74Q32Q52 190 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 Q5BKY6 102 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 POM121L12Q8N7R1 296 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 OR11H4Q8NGC9 324 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 PPP1R1CQ8WVI7 109 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 CELA1Q9UNI1 258 aa13.39□□□□□ -0.27
LINC01238-205ENST00000567549 PITX3O75364 302 aa13.38□□□□□ -0.27
LINC01238-205ENST00000567549 PAX9P55771 341 aa13.38□□□□□ -0.27
LINC01238-205ENST00000567549 THAP8Q8NA92 274 aa13.38□□□□□ -0.27
LINC01238-205ENST00000567549 OR4D5Q8NGN0 318 aa13.38□□□□□ -0.27
LINC01238-205ENST00000567549 OR1B1Q8NGR6 318 aa13.38□□□□□ -0.27
LINC01238-205ENST00000567549 C16orf92Q96LL3 132 aa13.38□□□□□ -0.27
LINC01238-205ENST00000567549 GSKIPQ9P0R6 139 aa13.38□□□□□ -0.27
LINC01238-205ENST00000567549 IGKV1D-37A0A075B6S9 117 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 IGHV3OR16-12A0A075B7B8 117 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 SYNGR2O43760 224 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 MPC2O95563 127 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 IGKV3-20P01619 116 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 RLN2P04090 185 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 IAPPP10997 89 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 IL15RAQ13261 267 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 OR2F1Q13607 317 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 ZNF546Q86UE3 836 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 C9orf62Q8N4C0 152 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 ZBTB8BQ8NAP8 495 aaPredicted RBP13.37□□□□□ -0.27
LINC01238-205ENST00000567549 TMEM147Q9BVK8 224 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 HSPB11Q9Y547 144 aa13.37□□□□□ -0.27
LINC01238-205ENST00000567549 EMP1P54849 157 aa13.36□□□□□ -0.27
LINC01238-205ENST00000567549 B2MP61769 119 aa13.36□□□□□ -0.27
LINC01238-205ENST00000567549 AKR1C1Q04828 323 aa13.36□□□□□ -0.27
LINC01238-205ENST00000567549 LGALSLQ3ZCW2 172 aaPredicted RBP13.36□□□□□ -0.27
LINC01238-205ENST00000567549 UBE2DNLQ8IWF7 75 aa13.36□□□□□ -0.27
LINC01238-205ENST00000567549 NIPSNAP3BQ9BS92 247 aa13.36□□□□□ -0.27
LINC01238-205ENST00000567549 TMEM208Q9BTX3 173 aa13.36□□□□□ -0.27
LINC01238-205ENST00000567549 MAGT1Q9H0U3 335 aa13.36□□□□□ -0.27
LINC01238-205ENST00000567549 STRAPQ9Y3F4 350 aaKnown RBP13.36□□□□□ -0.27
LINC01238-205ENST00000567549 FXYD6-FXYD2A0A087WZ82 144 aa13.35□□□□□ -0.27
LINC01238-205ENST00000567549 WRBO00258 174 aa13.35□□□□□ -0.27
LINC01238-205ENST00000567549 SOCS3O14543 225 aa13.35□□□□□ -0.27
LINC01238-205ENST00000567549 DUSP14O95147 198 aaKnown RBP13.35□□□□□ -0.27
LINC01238-205ENST00000567549 RRN3P1Q2M238 152 aa13.35□□□□□ -0.27
LINC01238-205ENST00000567549 SLC25A22Q9H936 323 aa13.35□□□□□ -0.27
LINC01238-205ENST00000567549 DOK5Q9P104 306 aa13.35□□□□□ -0.27
LINC01238-205ENST00000567549 A0A0D9SG52 128 aa13.34□□□□□ -0.27
LINC01238-205ENST00000567549 A0A0J9YX75 114 aa13.34□□□□□ -0.27
LINC01238-205ENST00000567549 L7N2F9 121 aa13.34□□□□□ -0.27
LINC01238-205ENST00000567549 LRRC37A5PQ49AS3 106 aa13.34□□□□□ -0.27
LINC01238-205ENST00000567549 FAM78BQ5VT40 261 aa13.34□□□□□ -0.27
LINC01238-205ENST00000567549 INO80EQ8NBZ0 244 aaPredicted RBP13.34□□□□□ -0.27
LINC01238-205ENST00000567549 FRAS1Q86XX4 4008 aa13.33□□□□□ -0.28
LINC01238-205ENST00000567549 SOHLH1Q5JUK2 328 aa13.33□□□□□ -0.28
LINC01238-205ENST00000567549 SPANXN5Q5MJ07 72 aa13.33□□□□□ -0.28
LINC01238-205ENST00000567549 GDF5OSQ5U4N7 250 aa13.33□□□□□ -0.28
LINC01238-205ENST00000567549 ACOT7LQ6ZUV0 252 aa13.33□□□□□ -0.28
LINC01238-205ENST00000567549 ZNF767PQ75MW2 155 aa13.33□□□□□ -0.28
LINC01238-205ENST00000567549 ZNF709Q8N972 641 aa13.33□□□□□ -0.28
LINC01238-205ENST00000567549 DKK2Q9UBU2 259 aa13.33□□□□□ -0.28
LINC01238-205ENST00000567549 LOC102723971A0A1B0GUV8 181 aa13.32□□□□□ -0.28
LINC01238-205ENST00000567549 ZNF98A6NK75 572 aa13.32□□□□□ -0.28
LINC01238-205ENST00000567549 ARPC5O15511 151 aa13.32□□□□□ -0.28
LINC01238-205ENST00000567549 ORM2P19652 201 aa13.32□□□□□ -0.28
LINC01238-205ENST00000567549 FXYD7P58549 80 aa13.32□□□□□ -0.28
LINC01238-205ENST00000567549 SELENOTP62341 195 aa13.32□□□□□ -0.28
LINC01238-205ENST00000567549 RAB32Q13637 225 aa13.32□□□□□ -0.28
LINC01238-205ENST00000567549 FAM222AQ5U5X8 452 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms