RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 NKX2-8O15522 239 aa19.94■□□□□ 0.78
FANCA-221ENST00000566889 GCSHP23434 173 aa19.94■□□□□ 0.78
FANCA-221ENST00000566889 SPRNQ5BIV9 151 aa19.94■□□□□ 0.78
FANCA-221ENST00000566889 C10orf55Q5SWW7 151 aa19.94■□□□□ 0.78
FANCA-221ENST00000566889 ZNRD1Q9P1U0 126 aa19.94■□□□□ 0.78
FANCA-221ENST00000566889 HIGD1AQ9Y241 93 aa19.94■□□□□ 0.78
FANCA-221ENST00000566889 CNEP1R1Q8N9A8 125 aa19.93■□□□□ 0.78
FANCA-221ENST00000566889 GAFA1Q96PS6 74 aa19.93■□□□□ 0.78
FANCA-221ENST00000566889 F11RQ9Y624 299 aaKnown RBP19.93■□□□□ 0.78
FANCA-221ENST00000566889 FAM104BQ5XKR9 115 aa19.92■□□□□ 0.78
FANCA-221ENST00000566889 CLUHP3Q96NS8 147 aa19.92■□□□□ 0.78
FANCA-221ENST00000566889 SPANXB1Q9NS25 103 aaPredicted RBP19.92■□□□□ 0.78
FANCA-221ENST00000566889 DKK4Q9UBT3 224 aa19.92■□□□□ 0.78
FANCA-221ENST00000566889 FAM186AA6NE01 2351 aa19.92■□□□□ 0.78
FANCA-221ENST00000566889 FXYD2P54710 66 aa19.92■□□□□ 0.78
FANCA-221ENST00000566889 DUX4L9Q6RFH8 374 aaPredicted RBP19.92■□□□□ 0.78
FANCA-221ENST00000566889 RNF7Q9UBF6 113 aa19.92■□□□□ 0.78
FANCA-221ENST00000566889 TCTAP57738 103 aa19.91■□□□□ 0.78
FANCA-221ENST00000566889 FAM201AQ5SY85 155 aa19.91■□□□□ 0.78
FANCA-221ENST00000566889 PHLDA1Q8WV24 401 aaPredicted RBP19.91■□□□□ 0.78
FANCA-221ENST00000566889 EYSQ5T1H1 3165 aa19.91■□□□□ 0.78
FANCA-221ENST00000566889 K7EQM0 130 aa19.91■□□□□ 0.78
FANCA-221ENST00000566889 KIR2DL2P43627 348 aaPredicted RBP19.91■□□□□ 0.78
FANCA-221ENST00000566889 GATA4P43694 442 aa19.91■□□□□ 0.78
FANCA-221ENST00000566889 A0A1W2PPI3 338 aa19.9■□□□□ 0.78
FANCA-221ENST00000566889 NDUFS7O75251 213 aa19.9■□□□□ 0.78
FANCA-221ENST00000566889 MSMPQ1L6U9 139 aa19.9■□□□□ 0.78
FANCA-221ENST00000566889 FAM169BQ8N8A8 192 aa19.9■□□□□ 0.78
FANCA-221ENST00000566889 PCNX2A6NKB5 2137 aa19.9■□□□□ 0.78
FANCA-221ENST00000566889 SERTM2A0A1B0GWG4 89 aa19.9■□□□□ 0.78
FANCA-221ENST00000566889 LINC00312Q9Y6C7 94 aa19.9■□□□□ 0.78
FANCA-221ENST00000566889 EXOC3-AS1Q8N2X6 119 aa19.89■□□□□ 0.77
FANCA-221ENST00000566889 CHAC1Q9BUX1 264 aa19.89■□□□□ 0.77
FANCA-221ENST00000566889 TM2D2Q9BX73 214 aa19.89■□□□□ 0.77
FANCA-221ENST00000566889 FBLL1A6NHQ2 334 aaKnown RBP19.88■□□□□ 0.77
FANCA-221ENST00000566889 IGLV2-23P01705 113 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 TM4SF20Q53R12 229 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 TCTEX1D4Q5JR98 221 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 ZNF788Q6ZQV5 615 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 ZNF576Q9H609 170 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 VSTM5A8MXK1 200 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 E9PLD3 99 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 SPRY3O43610 288 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 THBDP07204 575 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 VMA21Q3ZAQ7 101 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 PSG8Q9UQ74 426 aa19.88■□□□□ 0.77
FANCA-221ENST00000566889 A0A1W2PRD5 423 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 A0A1W2PRF3 423 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 A0A1W2PRM7 423 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 TNFRSF1AP19438 455 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 SRSF1Q07955 248 aaKnown RBP eCLIP19.87■□□□□ 0.772e-8■■■■□ 21.2
FANCA-221ENST00000566889 RUSC1-AS1Q66K80 236 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 TPPP3Q9BW30 176 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 DSCAMO60469 2012 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 SCGB2A2Q13296 93 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 CCL13Q99616 98 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 ZMAT4Q9H898 229 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 DKK2Q9UBU2 259 aa19.87■□□□□ 0.77
FANCA-221ENST00000566889 CCDC144NLQ6NUI1 221 aa19.86■□□□□ 0.77
FANCA-221ENST00000566889 Q71RC1 249 aaPredicted RBP19.86■□□□□ 0.77
FANCA-221ENST00000566889 SLC25A39Q9BZJ4 359 aaPredicted RBP19.86■□□□□ 0.77
FANCA-221ENST00000566889 SH3BGRL2Q9UJC5 107 aa19.86■□□□□ 0.77
FANCA-221ENST00000566889 HLA-DRB4P13762 266 aa19.86■□□□□ 0.77
FANCA-221ENST00000566889 MRPL51Q4U2R6 128 aaKnown RBP19.86■□□□□ 0.77
FANCA-221ENST00000566889 AMN1Q8IY45 258 aa19.86■□□□□ 0.77
FANCA-221ENST00000566889 LYPD1Q8N2G4 141 aa19.86■□□□□ 0.77
FANCA-221ENST00000566889 ZNF71Q9NQZ8 489 aaPredicted RBP19.86■□□□□ 0.77
FANCA-221ENST00000566889 HLA-DRB4X5D2U9 266 aa19.86■□□□□ 0.77
FANCA-221ENST00000566889 CRIP1P50238 77 aa19.85■□□□□ 0.77
FANCA-221ENST00000566889 RAB9AP51151 201 aa19.85■□□□□ 0.77
FANCA-221ENST00000566889 CEND1Q8N111 149 aa19.85■□□□□ 0.77
FANCA-221ENST00000566889 FAM216BQ8N7L0 139 aa19.85■□□□□ 0.77
FANCA-221ENST00000566889 TMEM178AQ8NBL3 297 aa19.85■□□□□ 0.77
FANCA-221ENST00000566889 WI2-2373I1.2A0A1W2PRP0 233 aa19.84■□□□□ 0.77
FANCA-221ENST00000566889 CKS1BP61024 79 aa19.84■□□□□ 0.77
FANCA-221ENST00000566889 LINC01559Q495D7 138 aa19.84■□□□□ 0.77
FANCA-221ENST00000566889 LYZL1Q6UWQ5 148 aa19.84■□□□□ 0.77
FANCA-221ENST00000566889 S100A7AQ86SG5 101 aa19.84■□□□□ 0.77
FANCA-221ENST00000566889 RITA1Q96K30 269 aa19.84■□□□□ 0.77
FANCA-221ENST00000566889 WFDC2Q14508 124 aa19.84■□□□□ 0.77
FANCA-221ENST00000566889 HCP5Q6MZN7 132 aa19.84■□□□□ 0.77
FANCA-221ENST00000566889 PATE3B3GLJ2 98 aa19.83■□□□□ 0.77
FANCA-221ENST00000566889 LYZP61626 148 aa19.83■□□□□ 0.77
FANCA-221ENST00000566889 PEAR1Q5VY43 1037 aaPredicted RBP19.83■□□□□ 0.77
FANCA-221ENST00000566889 DEFB108BQ8NET1 73 aa19.83■□□□□ 0.77
FANCA-221ENST00000566889 FER1L6-AS2Q96M78 137 aa19.83■□□□□ 0.77
FANCA-221ENST00000566889 C18orf15Q96N68 181 aa19.83■□□□□ 0.77
FANCA-221ENST00000566889 COL27A1Q8IZC6 1860 aaPredicted RBP19.83■□□□□ 0.76
FANCA-221ENST00000566889 NHP2Q9NX24 153 aaKnown RBP19.83■□□□□ 0.76
FANCA-221ENST00000566889 FRYQ5TBA9 3013 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 TRBV19A0A075B6N1 114 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 TMEM213A2RRL7 107 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 PRR33A8MZF0 331 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 IGLL5B9A064 214 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 K7ERJ3 54 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 IGFBP4P22692 258 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 FXYD7P58549 80 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 ZNF502Q8TBZ5 544 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 SPAG8Q99932 426 aaPredicted RBP19.82■□□□□ 0.76
FANCA-221ENST00000566889 HHLA3Q9XRX5 114 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms