RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 STX12Q86Y82 276 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 C2orf50Q96LR7 162 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 DOK5Q9P104 306 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 GOLT1BQ9Y3E0 138 aa12.15□□□□□ -0.46
USB1-211ENST00000565662 TRAV6A0A075B6T7 132 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 A0A087X0K7 114 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 TRAV10A0A0B4J240 114 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 C7orf66A4D0T2 115 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 LY6G6CO95867 125 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 MBPP02686 304 aaPredicted RBP12.14□□□□□ -0.47
USB1-211ENST00000565662 OR5G3P0C626 314 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 PSG9Q00887 426 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 ENKURQ8TC29 256 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 PTTG2Q9NZH5 202 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 X6R8D5 127 aa12.14□□□□□ -0.47
USB1-211ENST00000565662 A0A0J9YX75 114 aa12.13□□□□□ -0.47
USB1-211ENST00000565662 FAM25EA8MYX2 175 aa12.13□□□□□ -0.47
USB1-211ENST00000565662 PRAF2O60831 178 aa12.13□□□□□ -0.47
USB1-211ENST00000565662 NANOS2P60321 138 aaKnown RBP12.13□□□□□ -0.47
USB1-211ENST00000565662 RRAS2P62070 204 aaPredicted RBP12.13□□□□□ -0.47
USB1-211ENST00000565662 ZNF705AQ6ZN79 300 aaPredicted RBP12.13□□□□□ -0.47
USB1-211ENST00000565662 OR4B1Q8NGF8 309 aa12.13□□□□□ -0.47
USB1-211ENST00000565662 RSG1Q9BU20 258 aa12.13□□□□□ -0.47
USB1-211ENST00000565662 XCL2Q9UBD3 114 aa12.13□□□□□ -0.47
USB1-211ENST00000565662 RFNGQ9Y644 331 aa12.13□□□□□ -0.47
USB1-211ENST00000565662 A8MTW9 85 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 ZNF705FA8MVS1 300 aaPredicted RBP12.12□□□□□ -0.47
USB1-211ENST00000565662 ZNF705DP0CH99 300 aaPredicted RBP12.12□□□□□ -0.47
USB1-211ENST00000565662 ZNF705BP0CI00 300 aaPredicted RBP12.12□□□□□ -0.47
USB1-211ENST00000565662 S100A11P31949 105 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 BCAP31P51572 246 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 CAV2P51636 162 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 LCN15Q6UWW0 184 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 Q6ZRG5 221 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 BPIFA4PQ86YQ2 179 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 LRRC20Q8TCA0 184 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 PFDN5Q99471 154 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 SLC50A1Q9BRV3 221 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 ARV1Q9H2C2 271 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 SACSQ9NZJ4 4579 aa12.12□□□□□ -0.47
USB1-211ENST00000565662 MPDU1O75352 247 aa12.11□□□□□ -0.47
USB1-211ENST00000565662 GATA2P23769 480 aaPredicted RBP12.11□□□□□ -0.47
USB1-211ENST00000565662 CYCSP99999 105 aaKnown RBP12.11□□□□□ -0.47
USB1-211ENST00000565662 SLC38A11Q08AI6 406 aa12.11□□□□□ -0.47
USB1-211ENST00000565662 ATP6V1FQ16864 119 aa12.11□□□□□ -0.47
USB1-211ENST00000565662 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.11□□□□□ -0.47
USB1-211ENST00000565662 OR1L4Q8NGR5 311 aa12.11□□□□□ -0.47
USB1-211ENST00000565662 ARL6Q9H0F7 186 aa12.11□□□□□ -0.47
USB1-211ENST00000565662 LYRM2Q9NU23 88 aaPredicted RBP12.11□□□□□ -0.47
USB1-211ENST00000565662 LSM5Q9Y4Y9 91 aaKnown RBP12.11□□□□□ -0.47
USB1-211ENST00000565662 RYR2Q92736 4967 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 AGPAT2O15120 278 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 COX7A2P2O60397 106 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 UPK1BO75841 260 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 HBE1P02100 147 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 RLN2P04090 185 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 SPART-AS1P0CW21 52 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 RBMY1A1P0DJD3 496 aaKnown RBP12.1□□□□□ -0.47
USB1-211ENST00000565662 RBMY1CP0DJD4 496 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 SULT1A1P50225 295 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 DEFA1P59665 94 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 DEFA3P59666 94 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 RBMY1FQ15415 496 aaKnown RBP12.1□□□□□ -0.47
USB1-211ENST00000565662 FAM78BQ5VT40 261 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 ZNF709Q8N972 641 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 FAM210BQ96KR6 192 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 RNF126Q9BV68 326 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 SCRT1Q9BWW7 348 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 UQCC1Q9NVA1 299 aa12.1□□□□□ -0.47
USB1-211ENST00000565662 CCSO14618 274 aa12.09□□□□□ -0.47
USB1-211ENST00000565662 HLA-DMBP28068 263 aa12.09□□□□□ -0.47
USB1-211ENST00000565662 CAMLGP49069 296 aa12.09□□□□□ -0.47
USB1-211ENST00000565662 GUK1Q16774 197 aa12.09□□□□□ -0.47
USB1-211ENST00000565662 IGF2BP2-AS1Q96M15 143 aa12.09□□□□□ -0.47
USB1-211ENST00000565662 SEC22CQ9BRL7 303 aa12.09□□□□□ -0.47
USB1-211ENST00000565662 KCNIP2Q9NS61 270 aa12.09□□□□□ -0.47
USB1-211ENST00000565662 DEFB4AO15263 64 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 INSP01308 110 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 S100A10P60903 97 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 FGL1Q08830 312 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 GDF5OSQ5U4N7 250 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 C10orf113Q5VZT2 155 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 TMEM182Q6ZP80 229 aaPredicted RBP12.08□□□□□ -0.48
USB1-211ENST00000565662 LINC00305Q7Z4B0 112 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 TMEM256Q8N2U0 113 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 ZNF738Q8NE65 137 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 TMEM208Q9BTX3 173 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 BATF3Q9NR55 127 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 PXMP4Q9Y6I8 212 aa12.08□□□□□ -0.48
USB1-211ENST00000565662 DNAH1Q9P2D7 4330 aa12.07□□□□□ -0.48
USB1-211ENST00000565662 ALMS1Q8TCU4 4167 aa12.07□□□□□ -0.48
USB1-211ENST00000565662 IGKV3-20P01619 116 aa12.07□□□□□ -0.48
USB1-211ENST00000565662 PET100P0DJ07 73 aa12.07□□□□□ -0.48
USB1-211ENST00000565662 OXA1LQ15070 435 aa12.07□□□□□ -0.48
USB1-211ENST00000565662 RRN3P1Q2M238 152 aa12.07□□□□□ -0.48
USB1-211ENST00000565662 VWC2Q2TAL6 325 aa12.07□□□□□ -0.48
USB1-211ENST00000565662 NMES1Q9C002 83 aa12.07□□□□□ -0.48
USB1-211ENST00000565662 SLC25A31Q9H0C2 315 aa12.07□□□□□ -0.48
USB1-211ENST00000565662 PPP1R14DQ9NXH3 145 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 300 ms