RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 RARRES2Q99969 163 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 GNG13Q9P2W3 67 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 IGHV3-49A0A0A0MS15 119 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 RBFOX3A6NFN3 312 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 MRPS12O15235 138 aaKnown RBP7.76□□□□□ -1.17
SMG1-208ENST00000563448 SNRPCP09234 159 aaKnown RBP7.76□□□□□ -1.17
SMG1-208ENST00000563448 EDN2P20800 178 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 NPPCP23582 126 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 TM4SF20Q53R12 229 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 REC114Q7Z4M0 266 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 S100A7AQ86SG5 101 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 EIF4E3Q8N5X7 224 aaKnown RBP7.76□□□□□ -1.17
SMG1-208ENST00000563448 RAX2Q96IS3 184 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 TMEM231Q9H6L2 316 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 TMEM14CQ9P0S9 112 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 IGHV3OR16-13A0A075B7E8 117 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 IGHV3-74A0A0B4J1X5 117 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 IGHV3-66A0A0C4DH42 116 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 LOC102723971A0A1B0GUV8 181 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 K7EMT4 169 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 LGALS9O00182 355 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 SYNJ2BPP57105 145 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 KLF5Q13887 457 aaPredicted RBP7.75□□□□□ -1.17
SMG1-208ENST00000563448 KRTAP24-1Q3LI83 254 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 STXBP6Q8NFX7 210 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 DPF1Q92782 380 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 TMEM167BQ9NRX6 74 aa7.75□□□□□ -1.17
SMG1-208ENST00000563448 PAGE4O60829 102 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 CD5P06127 495 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 BCL2P10415 239 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 ATF4P18848 351 aaPredicted RBP7.74□□□□□ -1.17
SMG1-208ENST00000563448 S100A7P31151 101 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 PPT1P50897 306 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 UBE2G2P60604 165 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 UBE2L3P68036 154 aaKnown RBP7.74□□□□□ -1.17
SMG1-208ENST00000563448 ICAM4Q14773 271 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 AWAT1Q58HT5 328 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 ZNF506Q5JVG8 444 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 BPIFA4PQ86YQ2 179 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 C1QL4Q86Z23 238 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 EIF5A2Q9GZV4 153 aaKnown RBP7.74□□□□□ -1.17
SMG1-208ENST00000563448 MANBALQ9NQG1 85 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 SMAD5-AS1Q9Y6J3 95 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 WNK1Q9H4A3 2382 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 NIPBLQ6KC79 2804 aaeCLIP7.74□□□□□ -1.177e-6■□□□□ 10.5
SMG1-208ENST00000563448 SETD2Q9BYW2 2564 aaPredicted RBP7.74□□□□□ -1.17
SMG1-208ENST00000563448 IGHV7-4-1A0A0J9YVY3 117 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 A8MWP6 167 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 C9JQL5 133 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 H3BQ15 152 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 IFNA1P01562 189 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 IGLC2P0DOY2 106 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 FHL3Q13643 280 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 C16orf54Q6UWD8 224 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 RXFP4Q8TDU9 374 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 C17orf77Q96MU5 243 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 DAZ1Q9NQZ3 744 aaKnown RBP7.74□□□□□ -1.17
SMG1-208ENST00000563448 ZNF586Q9NXT0 402 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
SMG1-208ENST00000563448 YTHDF2Q9Y5A9 579 aaKnown RBP7.74□□□□□ -1.17
SMG1-208ENST00000563448 TMEM213A2RRL7 107 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 FAM74A7A6NL05 159 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 H3BTX0 84 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 CCL24O00175 119 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 NBEAP1P0C6P0 100 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 HIST1H1EP10412 219 aaKnown RBP7.73□□□□□ -1.17
SMG1-208ENST00000563448 NSUN5P1Q3KNT7 163 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 C1orf194Q5T5A4 169 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 UQCC3Q6UW78 93 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 NDUFA11Q86Y39 141 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 OR8I2Q8N0Y5 310 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 BLNKQ8WV28 456 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 DLX4Q92988 240 aaPredicted RBP7.73□□□□□ -1.17
SMG1-208ENST00000563448 SMPXQ9UHP9 88 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 VAX2Q9UIW0 290 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 RNF24Q9Y225 148 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 JMJD1CQ15652 2540 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 CHEK1O14757 476 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 RPL7P18124 248 aaKnown RBP7.73□□□□□ -1.17
SMG1-208ENST00000563448 ATP5G3P48201 142 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 PEA15Q15121 130 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 GLMPQ8WWB7 406 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 TREM1Q9NP99 234 aa7.73□□□□□ -1.17
SMG1-208ENST00000563448 A0A1W2PS18 150 aa7.72□□□□□ -1.17
SMG1-208ENST00000563448 SRP19P09132 144 aaKnown RBP7.72□□□□□ -1.17
SMG1-208ENST00000563448 CD81P60033 236 aa7.72□□□□□ -1.17
SMG1-208ENST00000563448 MEF2BQ02080 365 aaPredicted RBP7.72□□□□□ -1.17
SMG1-208ENST00000563448 CST9LP1Q5W188 147 aa7.72□□□□□ -1.17
SMG1-208ENST00000563448 OR4F17Q8NGA8 305 aa7.72□□□□□ -1.17
SMG1-208ENST00000563448 NARS2Q96I59 477 aaKnown RBP7.72□□□□□ -1.17
SMG1-208ENST00000563448 GPR82Q96P67 336 aa7.72□□□□□ -1.17
SMG1-208ENST00000563448 OR4F4Q96R69 305 aa7.72□□□□□ -1.17
SMG1-208ENST00000563448 CITED1Q99966 193 aa7.72□□□□□ -1.17
SMG1-208ENST00000563448 RHPN1-AS1Q9BWJ2 59 aa7.72□□□□□ -1.17
SMG1-208ENST00000563448 ARL2-SNX15V9GYD0 113 aa7.72□□□□□ -1.17
SMG1-208ENST00000563448 TRBV19A0A075B6N1 114 aa7.71□□□□□ -1.17
SMG1-208ENST00000563448 A0A1W2PRE2 83 aa7.71□□□□□ -1.17
SMG1-208ENST00000563448 C2orf70A6NJV1 201 aa7.71□□□□□ -1.17
SMG1-208ENST00000563448 C11orf94C9JXX5 98 aa7.71□□□□□ -1.17
SMG1-208ENST00000563448 NDUFB4O95168 129 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms