RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 CXCL17Q6UXB2 119 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 RNF182Q8N6D2 247 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 ZNF645Q8N7E2 425 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 TMEM106BQ9NUM4 274 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 INSL5Q9Y5Q6 135 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 LAMA3Q16787 3333 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 PLXNB2O15031 1838 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 ZNF860A6NHJ4 632 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 IGLL1P15814 213 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 ELOBQ15370 118 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 TGIF1Q15583 401 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 LINC00526Q96FQ7 95 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 LYZL4Q96KX0 146 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 EIF5A2Q9GZV4 153 aaKnown RBP3.6□□□□□ -1.83
SMG1-207ENST00000563235 SCN8AQ9UQD0 1980 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 EPG5Q9HCE0 2579 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 FAM208BQ5VWN6 2430 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 TRAV13-1A0A0B4J241 112 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 EPM2AB3EWF7 344 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 M0R1X1 148 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 COX7A2P2O60397 106 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 SLC25A5P05141 298 aaKnown RBP3.6□□□□□ -1.83
SMG1-207ENST00000563235 RNASE1P07998 156 aaKnown RBP3.6□□□□□ -1.83
SMG1-207ENST00000563235 CTSEP14091 401 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 FOXI1Q12951 378 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 KIAA0087Q14695 138 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 RRN3P1Q2M238 152 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 ZNF584Q8IVC4 421 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 OR4B1Q8NGF8 309 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 TIMM17AQ99595 171 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 TBL1YQ9BQ87 522 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 TMEM242Q9NWH2 141 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 DENND4CQ5VZ89 1909 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 CHD6Q8TD26 2715 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 SCO2A0A1W2PP80 73 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 K7ERJ3 54 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 PPP1R3DO95685 299 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 CGAP01215 116 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 IGHV1-2P23083 117 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 LINC00205P59089 165 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 ADIGQ0VDE8 80 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 FBXL19-AS1Q494R0 122 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 CLLU1OSQ5K130 101 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 AADACL3Q5VUY0 350 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 TMEM61Q8N0U2 210 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 RNASE6Q93091 150 aaKnown RBP3.6□□□□□ -1.83
SMG1-207ENST00000563235 AGPAT4-IT1Q9H0P7 198 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 EYSQ5T1H1 3165 aa3.6□□□□□ -1.83
SMG1-207ENST00000563235 CCDC88CQ9P219 2028 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 K7EQG2 157 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 YPEL1O60688 119 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 TRGC1P0CF51 173 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 ZNF286BP0CG31 522 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 PYYP10082 97 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 FAUP35544 74 aaKnown RBP3.59□□□□□ -1.83
SMG1-207ENST00000563235 SNCAP37840 140 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 YPEL3P61236 119 aaPredicted RBP3.59□□□□□ -1.83
SMG1-207ENST00000563235 Q0VG73 95 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 MUC21Q5SSG8 566 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 ZNF322Q6U7Q0 402 aaPredicted RBP3.59□□□□□ -1.83
SMG1-207ENST00000563235 AMTNQ6UX39 209 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 AQP10Q96PS8 301 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 YPEL2Q96QA6 119 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 NOP16Q9Y3C1 178 aaKnown RBP3.59□□□□□ -1.83
SMG1-207ENST00000563235 SLC25A15Q9Y619 301 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 DOCK8Q8NF50 2099 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 GREB1Q4ZG55 1949 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 CACNA1GO43497 2377 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 GPR179Q6PRD1 2367 aa3.59□□□□□ -1.83
SMG1-207ENST00000563235 TRBV24-1A0A075B6N3 115 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 TRAV9-1A0A075B6T8 112 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 IGHV1-58A0A0C4DH39 117 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 A0A0D9SEW6 157 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 INAFM1C9JVW0 142 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 TMEM262E9PQX1 116 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 TMEM250H0YL14 139 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 UQCRQO14949 82 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 DUSP14O95147 198 aaKnown RBP3.59□□□□□ -1.84
SMG1-207ENST00000563235 NXPH4O95158 308 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 RPS10P46783 165 aaKnown RBP3.59□□□□□ -1.84
SMG1-207ENST00000563235 OR2T2Q6IF00 324 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 C11orf71Q6IPW1 123 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 C2orf15Q8WU43 125 aaKnown RBP3.59□□□□□ -1.84
SMG1-207ENST00000563235 NEUROG1Q92886 237 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 ZNF702PQ9H963 129 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 NUP210LQ5VU65 1888 aa3.59□□□□□ -1.84
SMG1-207ENST00000563235 SPTBN4Q9H254 2564 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 IGLV5-45A0A087WSX0 123 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 IGHV3-38A0A0C4DH36 116 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 TMEM256-PLSCR3K7ERE1 68 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 IL3RAP26951 378 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 S100A3P33764 101 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 SNRPD3P62318 126 aaKnown RBP3.58□□□□□ -1.84
SMG1-207ENST00000563235 MRPL2Q5T653 305 aaKnown RBP3.58□□□□□ -1.84
SMG1-207ENST00000563235 GGNQ86UU5 652 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 METTL27Q8N6F8 245 aaPredicted RBP3.58□□□□□ -1.84
SMG1-207ENST00000563235 OR5D16Q8NGK9 328 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 OR51H1Q8NH63 302 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 H1FXQ92522 213 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms