RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 SLURP1P55000 103 aa17.14■□□□□ 0.33
SYNGR3-202ENST00000562045 PMS2P11Q13670 270 aa17.14■□□□□ 0.33
SYNGR3-202ENST00000562045 SCRT1Q9BWW7 348 aa17.14■□□□□ 0.33
SYNGR3-202ENST00000562045 TMPRSS5Q9H3S3 457 aa17.14■□□□□ 0.33
SYNGR3-202ENST00000562045 IGHV3OR16-8A0A075B7F1 116 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 IFNA1P01562 189 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 GCHFRP30047 84 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 RPEL1Q2QD12 228 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 EIF4E3Q8N5X7 224 aaKnown RBP17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 METTL26Q96S19 204 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 C20orf24Q9BUV8 137 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 GNG13Q9P2W3 67 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 HSPB1P04792 205 aaKnown RBP17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 FAM106AQ4KMX7 169 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 GPHB5Q86YW7 130 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 WFDC9Q8NEX5 89 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 TMEM167BQ9NRX6 74 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 NOTCH3Q9UM47 2321 aa17.13■□□□□ 0.33
SYNGR3-202ENST00000562045 ZNF98A6NK75 572 aa17.12■□□□□ 0.33
SYNGR3-202ENST00000562045 GUK1Q16774 197 aa17.12■□□□□ 0.33
SYNGR3-202ENST00000562045 TMEM190Q8WZ59 177 aa17.12■□□□□ 0.33
SYNGR3-202ENST00000562045 ZNF503Q96F45 646 aa17.12■□□□□ 0.33
SYNGR3-202ENST00000562045 PAXXQ9BUH6 204 aa17.12■□□□□ 0.33
SYNGR3-202ENST00000562045 EIF5A2Q9GZV4 153 aaKnown RBP17.12■□□□□ 0.33
SYNGR3-202ENST00000562045 OR51M1Q9H341 326 aa17.12■□□□□ 0.33
SYNGR3-202ENST00000562045 MANBALQ9NQG1 85 aa17.12■□□□□ 0.33
SYNGR3-202ENST00000562045 LINC01619G3V211 115 aa17.11■□□□□ 0.33
SYNGR3-202ENST00000562045 LEMD1Q68G75 181 aa17.11■□□□□ 0.33
SYNGR3-202ENST00000562045 UQCC3Q6UW78 93 aa17.11■□□□□ 0.33
SYNGR3-202ENST00000562045 UNQ9165/PRO28630Q6UXU0 137 aa17.11■□□□□ 0.33
SYNGR3-202ENST00000562045 CITED4Q96RK1 184 aa17.11■□□□□ 0.33
SYNGR3-202ENST00000562045 RBFOX3A6NFN3 312 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 NPPCP23582 126 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 HAGHQ16775 308 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 TOR2AQ5JU69 321 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 DPF1Q92782 380 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 DLX4Q92988 240 aaPredicted RBP17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 ZNF320A2RRD8 509 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 OR10J4P0C629 311 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 BCL2P10415 239 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 IGLL1P15814 213 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 CD33P20138 364 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 ZP3P21754 424 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 CRYBB3P26998 211 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 TAGLN2P37802 199 aaKnown RBP17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 UBE2L3P68036 154 aaKnown RBP17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 BPIFA4PQ86YQ2 179 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 TMEM14CQ9P0S9 112 aa17.1■□□□□ 0.33
SYNGR3-202ENST00000562045 HOXD3P31249 432 aaPredicted RBP17.09■□□□□ 0.33
SYNGR3-202ENST00000562045 OXLD1Q5BKU9 147 aa17.09■□□□□ 0.33
SYNGR3-202ENST00000562045 NARS2Q96I59 477 aaKnown RBP17.09■□□□□ 0.33
SYNGR3-202ENST00000562045 PYYP10082 97 aa17.08■□□□□ 0.32
SYNGR3-202ENST00000562045 GP9P14770 177 aa17.08■□□□□ 0.32
SYNGR3-202ENST00000562045 DAZ1Q9NQZ3 744 aaKnown RBP17.08■□□□□ 0.32
SYNGR3-202ENST00000562045 NOTCH1P46531 2555 aa17.08■□□□□ 0.32
SYNGR3-202ENST00000562045 G3V4G9 280 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 BUB3O43684 328 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 PEA15Q15121 130 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 ZNF506Q5JVG8 444 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 SUN5Q8TC36 379 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 SMDT1Q9H4I9 107 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 UFC1Q9Y3C8 167 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 LOC102723971A0A1B0GUV8 181 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 K7EMT4 169 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 ZNF207O43670 478 aaKnown RBP17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 CD5P06127 495 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 RPL7P18124 248 aaKnown RBP17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 SRSF3P84103 164 aaKnown RBP17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 C1QL4Q86Z23 238 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 FXYD5Q96DB9 178 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 RARRES2Q99969 163 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 VAX2Q9UIW0 290 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 U3KQE9 123 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 ARL2-SNX15V9GYD0 113 aa17.07■□□□□ 0.32
SYNGR3-202ENST00000562045 PAGE4O60829 102 aa17.06■□□□□ 0.32
SYNGR3-202ENST00000562045 C1orf194Q5T5A4 169 aa17.06■□□□□ 0.32
SYNGR3-202ENST00000562045 REC114Q7Z4M0 266 aa17.06■□□□□ 0.32
SYNGR3-202ENST00000562045 OR8I2Q8N0Y5 310 aa17.06■□□□□ 0.32
SYNGR3-202ENST00000562045 GPR82Q96P67 336 aa17.06■□□□□ 0.32
SYNGR3-202ENST00000562045 TMEM231Q9H6L2 316 aa17.06■□□□□ 0.32
SYNGR3-202ENST00000562045 TREM1Q9NP99 234 aa17.06■□□□□ 0.32
SYNGR3-202ENST00000562045 DNAH3Q8TD57 4116 aa17.06■□□□□ 0.32
SYNGR3-202ENST00000562045 FBN3Q75N90 2809 aa17.06■□□□□ 0.32
SYNGR3-202ENST00000562045 LGALS9O00182 355 aa17.05■□□□□ 0.32
SYNGR3-202ENST00000562045 A0A1W2PS18 150 aa17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 HIST1H1EP10412 219 aaKnown RBP17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 UBE2G2P60604 165 aa17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 ICAM4Q14773 271 aa17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 RXFP4Q8TDU9 374 aa17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 A8MWP6 167 aa17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 MRPS12O15235 138 aaKnown RBP17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 NBEAP1P0C6P0 100 aa17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 SYNJ2BPP57105 145 aa17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 MEF2BQ02080 365 aaPredicted RBP17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 KLF5Q13887 457 aaPredicted RBP17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 TXNDC17Q9BRA2 123 aa17.04■□□□□ 0.32
SYNGR3-202ENST00000562045 APOHP02749 345 aaPredicted RBP17.03■□□□□ 0.32
SYNGR3-202ENST00000562045 TM4SF20Q53R12 229 aa17.03■□□□□ 0.32
SYNGR3-202ENST00000562045 SAMD5Q5TGI4 173 aa17.03■□□□□ 0.32
SYNGR3-202ENST00000562045 CST9LP1Q5W188 147 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms