RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 RUSC1-AS1Q66K80 236 aa11.33□□□□□ -0.6
SPG7-203ENST00000561702 MRPL54Q6P161 138 aaKnown RBP11.33□□□□□ -0.6
SPG7-203ENST00000561702 ZNF600Q6ZNG1 722 aa11.33□□□□□ -0.6
SPG7-203ENST00000561702 NHLRC2Q8NBF2 726 aa11.33□□□□□ -0.6
SPG7-203ENST00000561702 SLC25A39Q9BZJ4 359 aaPredicted RBP11.33□□□□□ -0.6
SPG7-203ENST00000561702 Q9H3A6 140 aa11.33□□□□□ -0.6
SPG7-203ENST00000561702 MRPL27Q9P0M9 148 aaKnown RBP11.33□□□□□ -0.6
SPG7-203ENST00000561702 SPINK4O60575 86 aa11.32□□□□□ -0.6
SPG7-203ENST00000561702 LTAP01374 205 aa11.32□□□□□ -0.6
SPG7-203ENST00000561702 TCRAP04437 139 aa11.32□□□□□ -0.6
SPG7-203ENST00000561702 APELAP0DMC3 54 aa11.32□□□□□ -0.6
SPG7-203ENST00000561702 LYZP61626 148 aa11.32□□□□□ -0.6
SPG7-203ENST00000561702 DEFB113Q30KQ7 82 aa11.32□□□□□ -0.6
SPG7-203ENST00000561702 AJUBAQ96IF1 538 aa11.32□□□□□ -0.6
SPG7-203ENST00000561702 ANKRD17O75179 2603 aaKnown RBP11.32□□□□□ -0.6
SPG7-203ENST00000561702 TRBV6-1A0A0K0K1D8 114 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 FAM231BA6NCW3 169 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 A8MWL6 223 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 BMPR1BO00238 502 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 ZNF253O75346 499 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 FRMD6-AS1P0C7T7 363 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 GNG5P63218 68 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 FBLN7Q53RD9 439 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 LYPD1Q8N2G4 141 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 NUP35Q8NFH5 326 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 KCNS1Q96KK3 526 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 HSPB9Q9BQS6 159 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 GFRA4Q9GZZ7 299 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 ZNF586Q9NXT0 402 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 TBL2Q9Y4P3 447 aaKnown RBP11.31□□□□□ -0.6
SPG7-203ENST00000561702 PTPN13Q12923 2485 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 KIR2DL5BA0A0G2JN68 375 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 KIR2DL5BA0A0G2JPC4 375 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 GPX1P07203 203 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 MSMBP08118 114 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 SLC35B1P78383 322 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 Q6ZWC4 215 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 BPIFA4PQ86YQ2 179 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 KIR2DL5AQ8N109 375 aa11.31□□□□□ -0.6
SPG7-203ENST00000561702 ZNF48Q96MX3 618 aaPredicted RBP11.31□□□□□ -0.6
SPG7-203ENST00000561702 IGHV3-21A0A0B4J1V1 117 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
SPG7-203ENST00000561702 K7EIM0 57 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 ZNF705DP0CH99 300 aaPredicted RBP11.3□□□□□ -0.6
SPG7-203ENST00000561702 ZNF705BP0CI00 300 aaPredicted RBP11.3□□□□□ -0.6
SPG7-203ENST00000561702 SRIP30626 198 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 PRR27Q6MZM9 219 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 C19orf35Q6ZS72 473 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 LRRC75A-AS1Q8N1F1 130 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 PRSS22Q9GZN4 317 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 RPP21Q9H633 154 aaKnown RBP11.3□□□□□ -0.6
SPG7-203ENST00000561702 TENM4Q6N022 2769 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 TACC2O95359 2948 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 NPIPB5A8MRT5 1133 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 OR2J3O76001 311 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
SPG7-203ENST00000561702 IGKV1-17P01599 117 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 CD24P25063 80 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 SAA4P35542 130 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 C5orf64Q2M2E5 130 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 FAM162BQ5T6X4 162 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 TEX43Q6ZNM6 134 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 OR4F17Q8NGA8 305 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 DAZAP1Q96EP5 407 aaKnown RBP11.3□□□□□ -0.6
SPG7-203ENST00000561702 NEU1Q99519 415 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 SHANK2-AS3Q9BTD1 123 aa11.3□□□□□ -0.6
SPG7-203ENST00000561702 CR1P17927 2039 aa11.29□□□□□ -0.6
SPG7-203ENST00000561702 HIGD1CA8MV81 97 aa11.29□□□□□ -0.6
SPG7-203ENST00000561702 NPFFO15130 113 aa11.29□□□□□ -0.6
SPG7-203ENST00000561702 SCGB2A1O75556 95 aa11.29□□□□□ -0.6
SPG7-203ENST00000561702 P01737 135 aa11.29□□□□□ -0.6
SPG7-203ENST00000561702 ZNF562Q6V9R5 426 aa11.29□□□□□ -0.6
SPG7-203ENST00000561702 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
SPG7-203ENST00000561702 OR4B1Q8NGF8 309 aa11.29□□□□□ -0.6
SPG7-203ENST00000561702 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 B4DSR2 109 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 K7EQM0 130 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 C2orf88Q9BSF0 95 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 THYN1Q9P016 225 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 ASH1LQ9NR48 2969 aaKnown RBP11.28□□□□□ -0.6
SPG7-203ENST00000561702 H3BRN7 92 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 ZNF324O75467 553 aaPredicted RBP11.28□□□□□ -0.6
SPG7-203ENST00000561702 KLF5Q13887 457 aaPredicted RBP11.28□□□□□ -0.6
SPG7-203ENST00000561702 HES1Q14469 280 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 Q5PR19 223 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 TOMM20LQ6UXN7 152 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 MRPL52Q86TS9 123 aaKnown RBP11.28□□□□□ -0.6
SPG7-203ENST00000561702 C20orf144Q9BQM9 153 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 GSX1Q9H4S2 264 aaPredicted RBP11.28□□□□□ -0.6
SPG7-203ENST00000561702 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
SPG7-203ENST00000561702 POLQO75417 2590 aa11.27□□□□□ -0.6
SPG7-203ENST00000561702 VPS13CQ709C8 3753 aa11.27□□□□□ -0.61
SPG7-203ENST00000561702 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.61
SPG7-203ENST00000561702 A0A1B0GXF2 115 aa11.27□□□□□ -0.61
SPG7-203ENST00000561702 A0A1W2PS18 150 aa11.27□□□□□ -0.61
SPG7-203ENST00000561702 AMTP48728 403 aa11.27□□□□□ -0.61
SPG7-203ENST00000561702 MFAP4P55083 255 aa11.27□□□□□ -0.61
SPG7-203ENST00000561702 SLAQ13239 276 aa11.27□□□□□ -0.61
SPG7-203ENST00000561702 EBI3Q14213 229 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms