RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 RRAS2P62070 204 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-210ENST00000558879 C16orf92Q96LL3 132 aa12.22□□□□□ -0.45
LRRC28-210ENST00000558879 CCDC32Q9BV29 185 aa12.22□□□□□ -0.45
LRRC28-210ENST00000558879 SLC35B3Q9H1N7 401 aa12.22□□□□□ -0.45
LRRC28-210ENST00000558879 NPVFQ9HCQ7 196 aa12.22□□□□□ -0.45
LRRC28-210ENST00000558879 TRAV8-2A0A0B4J237 113 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 C7orf66A4D0T2 115 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 CCSO14618 274 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 FXYD7P58549 80 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 ARL16Q0P5N6 197 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 C12orf74Q32Q52 190 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 FAM78BQ5VT40 261 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 EBLN2Q6P2I7 272 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 AMTNQ6UX39 209 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 LINC00299Q6ZSB3 139 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 OR10P1Q8NGE3 313 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 OR4B1Q8NGF8 309 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 RSG1Q9BU20 258 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 NUDT15Q9NV35 164 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 DOK5Q9P104 306 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 MGAT4CQ9UBM8 478 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 HIGD1AQ9Y241 93 aa12.21□□□□□ -0.45
LRRC28-210ENST00000558879 SMIM9A6NGZ8 99 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 IGLL5B9A064 214 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 AMBPP02760 352 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 RAP2BP61225 183 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 PSG9Q00887 426 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 TEPPQ6URK8 271 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 UHRF2Q96PU4 802 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 C11orf1Q9H5F2 150 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 GSKIPQ9P0R6 139 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 VPS13DQ5THJ4 4388 aa12.2□□□□□ -0.46
LRRC28-210ENST00000558879 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 TRAV6A0A075B6T7 132 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 A0A087X0K7 114 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 HYPMO75409 117 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 PRR20EP86478 221 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 PRR20CP86479 221 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 PRR20DP86480 221 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 PRR20BP86481 221 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 PRR20AP86496 221 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 SLC38A11Q08AI6 406 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 PATE2Q6UY27 113 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 C1orf158Q8N1D5 194 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 ZNF431Q8TF32 576 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-210ENST00000558879 SEC22CQ9BRL7 303 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 RNF126Q9BV68 326 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 GGACTQ9BVM4 153 aa12.19□□□□□ -0.46
LRRC28-210ENST00000558879 TMEM189A5PLL7 270 aa12.18□□□□□ -0.46
LRRC28-210ENST00000558879 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
LRRC28-210ENST00000558879 RPL7P18124 248 aaKnown RBP12.18□□□□□ -0.46
LRRC28-210ENST00000558879 ZNF546Q86UE3 836 aa12.18□□□□□ -0.46
LRRC28-210ENST00000558879 OR5G3P0C626 314 aa12.17□□□□□ -0.46
LRRC28-210ENST00000558879 PXDC1Q5TGL8 231 aa12.17□□□□□ -0.46
LRRC28-210ENST00000558879 ZNF767PQ75MW2 155 aa12.17□□□□□ -0.46
LRRC28-210ENST00000558879 RNF182Q8N6D2 247 aa12.17□□□□□ -0.46
LRRC28-210ENST00000558879 ARL6Q9H0F7 186 aa12.17□□□□□ -0.46
LRRC28-210ENST00000558879 ARV1Q9H2C2 271 aa12.17□□□□□ -0.46
LRRC28-210ENST00000558879 GOLT1BQ9Y3E0 138 aa12.17□□□□□ -0.46
LRRC28-210ENST00000558879 RFNGQ9Y644 331 aa12.17□□□□□ -0.46
LRRC28-210ENST00000558879 NACAE9PAV3 2078 aa12.17□□□□□ -0.46
LRRC28-210ENST00000558879 IGHV3OR16-12A0A075B7B8 117 aa12.16□□□□□ -0.46
LRRC28-210ENST00000558879 DEFB131BA0A096LNP1 70 aa12.16□□□□□ -0.46
LRRC28-210ENST00000558879 AGPAT2O15120 278 aa12.16□□□□□ -0.46
LRRC28-210ENST00000558879 CNN1P51911 297 aaKnown RBP12.16□□□□□ -0.46
LRRC28-210ENST00000558879 ZNF846Q147U1 533 aa12.16□□□□□ -0.46
LRRC28-210ENST00000558879 IGFL4Q6B9Z1 124 aa12.16□□□□□ -0.46
LRRC28-210ENST00000558879 C12orf45Q8N5I9 185 aaPredicted RBP12.16□□□□□ -0.46
LRRC28-210ENST00000558879 OR11H7Q8NGC8 314 aa12.16□□□□□ -0.46
LRRC28-210ENST00000558879 IGF2BP2-AS1Q96M15 143 aa12.16□□□□□ -0.46
LRRC28-210ENST00000558879 MGST2Q99735 147 aa12.16□□□□□ -0.46
LRRC28-210ENST00000558879 LSM5Q9Y4Y9 91 aaKnown RBP12.16□□□□□ -0.46
LRRC28-210ENST00000558879 TEX48A0A1B0GUV7 120 aa12.15□□□□□ -0.46
LRRC28-210ENST00000558879 CRXO43186 299 aaPredicted RBP12.15□□□□□ -0.46
LRRC28-210ENST00000558879 H2AFB2P0C5Z0 115 aa12.15□□□□□ -0.46
LRRC28-210ENST00000558879 CXCL3P19876 107 aa12.15□□□□□ -0.46
LRRC28-210ENST00000558879 FGL1Q08830 312 aa12.15□□□□□ -0.46
LRRC28-210ENST00000558879 IL15RAQ13261 267 aa12.15□□□□□ -0.46
LRRC28-210ENST00000558879 S100A7AQ86SG5 101 aa12.15□□□□□ -0.46
LRRC28-210ENST00000558879 C2orf50Q96LR7 162 aa12.15□□□□□ -0.46
LRRC28-210ENST00000558879 DKK2Q9UBU2 259 aa12.15□□□□□ -0.46
LRRC28-210ENST00000558879 L7N2F9 121 aa12.14□□□□□ -0.47
LRRC28-210ENST00000558879 DUSP14O95147 198 aaKnown RBP12.14□□□□□ -0.47
LRRC28-210ENST00000558879 SPART-AS1P0CW21 52 aa12.14□□□□□ -0.47
LRRC28-210ENST00000558879 CXCL2P19875 107 aa12.14□□□□□ -0.47
LRRC28-210ENST00000558879 VAMP2P63027 116 aa12.14□□□□□ -0.47
LRRC28-210ENST00000558879 ASAH1Q13510 395 aa12.14□□□□□ -0.47
LRRC28-210ENST00000558879 S100ZQ8WXG8 99 aa12.14□□□□□ -0.47
LRRC28-210ENST00000558879 RNF24Q9Y225 148 aa12.14□□□□□ -0.47
LRRC28-210ENST00000558879 LOC102723971A0A1B0GUV8 181 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 C5orf51A6NDU8 294 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 FAM25EA8MYX2 175 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 GOSR2O14653 212 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 HBE1P02100 147 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 SPINK13Q1W4C9 94 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 VWC2Q2TAL6 325 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 FAM222AQ5U5X8 452 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 LINC00305Q7Z4B0 112 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 ZNF738Q8NE65 137 aa12.13□□□□□ -0.47
LRRC28-210ENST00000558879 LYRM2Q9NU23 88 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms