RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GATA1P15976 413 aaPredicted RBP3□□□□□ -1.93
ATXN3-248ENST00000558190 DRD3P35462 400 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 DLC1Q96QB1 1528 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 WISP1O95388 367 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 CDK5RAP2Q96SN8 1893 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 ARMS2P0C7Q2 107 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 FGF6P10767 208 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 DTX2Q86UW9 622 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 IGHV3OR16-10A0A075B7F0 116 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 LEPROTO15243 131 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 VDAC2P45880 294 aaPredicted RBP3□□□□□ -1.93
ATXN3-248ENST00000558190 C20orf78Q9BR46 151 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 MYO5BQ9ULV0 1848 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 Q6AWC8 147 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 POLQO75417 2590 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 MRPL35Q9NZE8 188 aaKnown RBP3□□□□□ -1.93
ATXN3-248ENST00000558190 GGTLC3B5MD39 225 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 E9PLD3 99 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 ARTNQ5T4W7 220 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 IGHMP01871 453 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 FOXC1Q12948 553 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 Q6ZR03 302 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 NEGR1Q7Z3B1 354 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 MAPKAPK5-AS1Q8N8E1 139 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 ANAPC10Q9UM13 185 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 C17orf77Q96MU5 243 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 IGLV3-21P80748 117 aaPredicted RBP3□□□□□ -1.93
ATXN3-248ENST00000558190 TCF15Q12870 199 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 ACACBO00763 2458 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 TRIP11Q15643 1979 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 TGFBR3LH3BV60 316 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 OR11H6Q8NGC7 330 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 ARHGAP21Q5T5U3 1957 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 KIDINS220Q9ULH0 1771 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 IGKV2-40A0A087WW87 121 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-248ENST00000558190 OVOL1O14753 267 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 IGKV2D-40P01614 121 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-248ENST00000558190 GCSAMQ8N6F7 178 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 GFRA3O60609 400 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 HERVK_113P63121 156 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 FAM27E3Q08E93 113 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 FAM57AQ8TBR7 257 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 CXCL10P02778 98 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 SHANK2-AS3Q9BTD1 123 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 PMS2CLQ68D20 193 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 CLTCL1P53675 1640 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 ZFC3H1O60293 1989 aaKnown RBP2.99□□□□□ -1.93
ATXN3-248ENST00000558190 PRB1P04280 392 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 ACYP1P07311 99 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 LINC00694P0DN24 101 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 COLCA1Q6ZS62 124 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 FNDC10F2Z333 226 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 INS-IGF2F8WCM5 200 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 INSP01308 110 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 PPP1R32Q7Z5V6 425 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 DPH3P1Q9H4G8 78 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 IMMP1LQ96LU5 166 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 TRAV12-1A0A0B4J245 112 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 LTAP01374 205 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 YPEL4Q96NS1 127 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 SRRM4A7MD48 611 aaKnown RBP2.99□□□□□ -1.93
ATXN3-248ENST00000558190 C3orf22Q8N5N4 141 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 hADV29S1A0JD25 119 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 ARRDC1-AS1Q9H2J1 176 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 C9orf172C9J069 976 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 GTSF1Q8WW33 167 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 GHRHP01286 108 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 FAM90A1Q86YD7 464 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 K7EN84 100 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 SAA1P0DJI8 122 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-248ENST00000558190 FMN2Q9NZ56 1722 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 DOCK6Q96HP0 2047 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 RBAKDNA6NC62 111 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 IGHG4P01861 327 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 TRGV3P03979 118 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 CASZ1Q86V15 1759 aa2.99□□□□□ -1.93
ATXN3-248ENST00000558190 MALP21145 153 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 METRNQ9UJH8 293 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 LMO7Q8WWI1 1683 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 DISP1Q96F81 1524 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 MSRB1Q9NZV6 116 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 LINC00473A8K010 186 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 TIMM23O14925 209 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 ZFP36L1Q07352 338 aaKnown RBP2.98□□□□□ -1.93
ATXN3-248ENST00000558190 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-248ENST00000558190 EEF1AKMT3Q96AZ1 226 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 WIPF2Q8TF74 440 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-248ENST00000558190 PKIGQ9Y2B9 76 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 C8orf49Q96NF6 230 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 CCDC179H3BU77 68 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 CEP170BQ9Y4F5 1589 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-248ENST00000558190 ZNF134P52741 427 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 ATP5J2P56134 94 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 DLG5Q8TDM6 1919 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 TMEM243Q9BU79 118 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 ACANP16112 2415 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 CELA3BP08861 270 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 TMEM42Q69YG0 159 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 SUMO4Q6EEV6 95 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 JPT1Q9UK76 154 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 550.3 ms