RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	TMEM186	Q96B77	213 aa		10.05	□□□□□ -0.8
TMPO-212	ENST00000556029		Q9H3A6	140 aa		10.05	□□□□□ -0.8
TMPO-212	ENST00000556029	PCSK5	Q92824	1860 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	NPIPB5	A8MRT5	1133 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	IGHV1-46	P01743	117 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	SAA1	P0DJI8	122 aa	Predicted RBP	10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	ACTL10	Q5JWF8	245 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	TREML4	Q6UXN2	200 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	TEX45	Q8NA69	505 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	IGHV3-64	A0A075B6Q5	118 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	NBL1	P41271	181 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	EFNB3	Q15768	340 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	SEPSECS	Q9HD40	501 aa	Known RBP	10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	ELOVL5	Q9NYP7	299 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	TRBV9	A0A0B4J1U6	114 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	APOBEC3A	P31941	199 aa	Predicted RBP	10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	MLANA	Q16655	118 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	DIRC2	Q96SL1	478 aa		10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	RPP21	Q9H633	154 aa	Known RBP	10.04	□□□□□ -0.8
TMPO-212	ENST00000556029	TRAV8-1	A0A0A6YYK1	113 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	TRAV3	A0A0B4J244	114 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	CEACAM4	O75871	244 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	SRD5A1	P18405	259 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	FBXL7	Q9UJT9	491 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	VPS13A	Q96RL7	3174 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	SAA2-SAA4	A0A096LPE2	208 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	SAA2	P0DJI9	122 aa	Predicted RBP	10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	RRN3P1	Q2M238	152 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	VWC2	Q2TAL6	325 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	CLEC19A	Q6UXS0	136 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	LOC105371242	A0A075B767	164 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	MBD3L3	A6NE82	208 aa	Predicted RBP	10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	FAM181B	A6NEQ2	426 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	TSPAN13	O95857	204 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	NCR2	O95944	276 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	PDLIM4	P50479	330 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	TMEM144	Q7Z5S9	345 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	FAM90A1	Q86YD7	464 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	KBTBD11-OT1	A0A1B0GTJ5	212 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	TRGV3	P03979	118 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	KLF17	Q5JT82	389 aa	Predicted RBP	10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	ORMDL3	Q8N138	153 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	LINC00479	Q96M42	142 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029	MGST2	Q99735	147 aa		10.03	□□□□□ -0.8
TMPO-212	ENST00000556029		A0A1B0GV72	72 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	hDV102S1	A0JD36	115 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	C21orf62	Q9NYP8	219 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	C15orf65	H3BRN8	121 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	TNFSF13	O75888	250 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	SAPCD1	Q5SSQ6	148 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	UNQ6494/PRO21346	Q6UXR6	183 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	ZNF664	Q8N3J9	261 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	GGTLC1	Q9BX51	225 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	MRPL32	Q9BYC8	188 aa	Known RBP	10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	F8	P00451	2351 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029		B9A039	149 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	YPEL1	O60688	119 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	LEP	P41159	167 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	YPEL2	Q96QA6	119 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	C19orf24	Q9BVV8	132 aa		10.02	□□□□□ -0.81
TMPO-212	ENST00000556029	IGKV1D-17	A0A075B6S4	117 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029		A0A1W2PS18	150 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	TMEM262	E9PQX1	116 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	MPV17L2	Q567V2	206 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	CLEC2A	Q6UVW9	174 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	C11orf44	Q8N8P7	122 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	FER1L6-AS1	Q8NA97	138 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	OSR1	Q8TAX0	266 aa	Predicted RBP	10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	TNRC18	O15417	2968 aa	Predicted RBP	10.01	□□□□□ -0.81
TMPO-212	ENST00000556029		A0A087X0K7	114 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	FOXH1	O75593	365 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	DNAL4	O96015	105 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	STAG3L3	P0CL85	134 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	TSPO	P30536	169 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	EXOC3-AS1	Q8N2X6	119 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	ZNF114	Q8NC26	417 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	OR2K2	Q8NGT1	345 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	TRAV9-2	A0A087WT02	112 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	TRAV8-2	A0A0B4J237	113 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029		A0A1W2PRE2	83 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	FAM90A9P	A6NNJ1	464 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	UBE2L6	O14933	153 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	DPM3	Q9P2X0	92 aa		10.01	□□□□□ -0.81
TMPO-212	ENST00000556029	IZUMO1R	A6ND01	250 aa		10	□□□□□ -0.81
TMPO-212	ENST00000556029	SRRM5	B3KS81	715 aa		10	□□□□□ -0.81
TMPO-212	ENST00000556029	ATP5J2	P56134	94 aa		10	□□□□□ -0.81
TMPO-212	ENST00000556029	FAM215A	Q9Y5M1	114 aa		10	□□□□□ -0.81
TMPO-212	ENST00000556029	FAM106A	Q4KMX7	169 aa		10	□□□□□ -0.81
TMPO-212	ENST00000556029	RNASE6	Q93091	150 aa	Known RBP	10	□□□□□ -0.81
TMPO-212	ENST00000556029	ATP5G2	Q06055	141 aa		10	□□□□□ -0.81
TMPO-212	ENST00000556029	CIRBP	Q14011	172 aa	Known RBP	10	□□□□□ -0.81
TMPO-212	ENST00000556029	COA6	Q5JTJ3	125 aa	Known RBP	10	□□□□□ -0.81
TMPO-212	ENST00000556029	IGFL4	Q6B9Z1	124 aa		10	□□□□□ -0.81
TMPO-212	ENST00000556029	LCNL1	Q6ZST4	164 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms