RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 IGHV3-66A0A0C4DH42 116 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 IGLL1P15814 213 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 EDN2P20800 178 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 TAS2R45P59539 299 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 RAB2AP61019 212 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 FAM90A2PQ658T7 463 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 DPPA3Q6W0C5 159 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
SHMT2-221ENST00000555773 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 RPP25LQ8N5L8 163 aaKnown RBP9.42□□□□□ -0.9
SHMT2-221ENST00000555773 TMED6Q8WW62 240 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 SCRT1Q9BWW7 348 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 SLC25A22Q9H936 323 aa9.42□□□□□ -0.9
SHMT2-221ENST00000555773 ZMAT5Q9UDW3 170 aaKnown RBP9.42□□□□□ -0.9
SHMT2-221ENST00000555773 TSPAN4O14817 238 aa9.41□□□□□ -0.9
SHMT2-221ENST00000555773 GALR1P47211 349 aa9.41□□□□□ -0.9
SHMT2-221ENST00000555773 PAFAH1B2P68402 229 aa9.41□□□□□ -0.9
SHMT2-221ENST00000555773 CD300EQ496F6 205 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-221ENST00000555773 LEMD1Q68G75 181 aa9.41□□□□□ -0.9
SHMT2-221ENST00000555773 TCF24Q7RTU0 167 aa9.41□□□□□ -0.9
SHMT2-221ENST00000555773 TMEM14CQ9P0S9 112 aa9.41□□□□□ -0.9
SHMT2-221ENST00000555773 TRAV5A0A0B4J249 113 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 CDC34P49427 236 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-221ENST00000555773 MEOX2P50222 304 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 SULT1A2P50226 295 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 RPL11P62913 178 aaKnown RBP9.4□□□□□ -0.9
SHMT2-221ENST00000555773 MORN5Q5VZ52 161 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 LCN12Q6JVE5 192 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 FAM122CQ6P4D5 195 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 SIGLEC15Q6ZMC9 328 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 MIR17HGQ75NE6 70 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 RAB24Q969Q5 203 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 FAM167A-AS1Q96KT0 104 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 PLA2G2EQ9NZK7 142 aa9.4□□□□□ -0.9
SHMT2-221ENST00000555773 TRAV2A0A0B4J234 112 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 CTXND1A0A1B0GTU2 59 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 ZNF785A8K8V0 405 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 MRPS12O15235 138 aaKnown RBP9.39□□□□□ -0.91
SHMT2-221ENST00000555773 KHDC3LQ587J8 217 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 SAMD13Q5VXD3 122 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 SPATA31B1PQ5VZV4 182 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 PQLC2Q6ZP29 291 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 RNF141Q8WVD5 230 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 SPAG8Q99932 426 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-221ENST00000555773 SLC25A2Q9BXI2 301 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 OR51M1Q9H341 326 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 MGAM2Q2M2H8 2515 aa9.39□□□□□ -0.91
SHMT2-221ENST00000555773 DNASE2O00115 360 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-221ENST00000555773 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
SHMT2-221ENST00000555773 ATF4P18848 351 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-221ENST00000555773 GUK1Q16774 197 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 TEX261Q6UWH6 196 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 MBD3L1Q8WWY6 194 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 HRH4Q9H3N8 390 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 NRN1Q9NPD7 142 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 SMAD5-AS1Q9Y6J3 95 aa9.38□□□□□ -0.91
SHMT2-221ENST00000555773 A0A087X0K7 114 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 OR4C46A6NHA9 309 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 OR7C2O60412 319 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 CXorf1O96002 111 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 IFNA7P01567 189 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 CMC4P56277 68 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-221ENST00000555773 ZNF726P1Q15940 193 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 SAMD5Q5TGI4 173 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 ALKAL2Q6UX46 152 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 FAM213BQ8TBF2 198 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 LRRC20Q8TCA0 184 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 MS4A6AQ9H2W1 248 aa9.37□□□□□ -0.91
SHMT2-221ENST00000555773 IZUMO1RA6ND01 250 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 ZNF253O75346 499 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 H2AFB1P0C5Y9 115 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 NBEAP1P0C6P0 100 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 IGLC2P0DOY2 106 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 GP9P14770 177 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 FHITP49789 147 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 BLOC1S1P78537 153 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 EGFEM1PQ0D2K5 195 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 GUCA2BQ16661 112 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 ZNF680Q8NEM1 530 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 SAT2Q96F10 170 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-221ENST00000555773 ZNF503Q96F45 646 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 CLEC5AQ9NY25 188 aa9.36□□□□□ -0.91
SHMT2-221ENST00000555773 PKD1L1Q8TDX9 2849 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 IGKV3-7A0A075B6H7 116 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 TRAV1-1A0A0B4J248 108 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 H3BQ15 152 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 TEX46H3BTG2 121 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 K7EQG2 157 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 ID1P41134 155 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 PDE6HQ13956 83 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 BEAN1Q3B7T3 259 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 FAM74A1Q5RGS3 127 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 LCN15Q6UWW0 184 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms